RNA–Protein interactions for RNA: ENST00000520602.5

MCF2-209, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MCF2, Length 3,945 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-209ENST00000520602 HGFACQ04756 655 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 OR5A2Q8NGI9 324 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 MS4A7Q9GZW8 240 aaPredicted RBP8.77□□□□□ -1.01
MCF2-209ENST00000520602 SLC25A31Q9H0C2 315 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 MPC1Q9Y5U8 109 aa8.77□□□□□ -1.01
MCF2-209ENST00000520602 TRAV14DV4A0A0A6YYC5 116 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 C3orf85A0A1B0GTC6 90 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 M0R1B8 84 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 SCTP09683 121 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 CRYGSP22914 178 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 ZNF83P51522 516 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 GFRA1P56159 465 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 RPL23AP62750 156 aaKnown RBP8.76□□□□□ -1.01
MCF2-209ENST00000520602 CEACAM21Q3KPI0 293 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 NHLRC3Q5JS37 347 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 TMEM65Q6PI78 240 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 Q6ZRG5 221 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 DEFB108BQ8NET1 73 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 RFESDQ8TAC1 157 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 SLC25A40Q8TBP6 338 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 HINT2Q9BX68 163 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 OPA3Q9H6K4 179 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 ZNF581Q9P0T4 197 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 RCL1Q9Y2P8 373 aaKnown RBP8.76□□□□□ -1.01
MCF2-209ENST00000520602 OR5B21A6NL26 309 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 TUSC1Q2TAM9 212 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 ZNF718Q3SXZ3 478 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 KIAA2026Q5HYC2 2103 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 SHEQ5VZ18 495 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 NUDT16L1Q9BRJ7 211 aaKnown RBP8.76□□□□□ -1.01
MCF2-209ENST00000520602 PRDM14Q9GZV8 571 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 CCL28Q9NRJ3 127 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 FBLN5Q9UBX5 448 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 FBXL17Q9UF56 701 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 PCP4L1A6NKN8 68 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 DKK1O94907 266 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 SLC25A4P12235 298 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 TMEM33P57088 247 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 IGFBP7Q16270 282 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 TMEM211Q6ICI0 200 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 H3F3CQ6NXT2 135 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 GAPTQ8N292 157 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 CYYR1Q96J86 154 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 CNTNAP3Q9BZ76 1288 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 MSL2Q9HCI7 577 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 ATG2AQ2TAZ0 1938 aa8.76□□□□□ -1.01
MCF2-209ENST00000520602 GLAP06280 429 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 S100A6P06703 90 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TDGF1P13385 188 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 SRSF6Q13247 344 aaKnown RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 SVBPQ8N300 66 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 ANGPTL6Q8NI99 470 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 RIMS4Q9H426 269 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 PLEKHA2Q9HB19 425 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 IL36RNQ9UBH0 155 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 IGKV1-27A0A075B6S5 117 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TAAR5O14804 337 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 MPPED1O15442 326 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 ADAM20O43506 726 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 CRYAAP02489 173 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 CSRP1P21291 193 aaKnown RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 POLR2GP62487 172 aaKnown RBP eCLIP8.75□□□□□ -1.01
MCF2-209ENST00000520602 RSPO1Q2MKA7 263 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 TMEM88Q6PEY1 159 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TMEM182Q6ZP80 229 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 TBC1D26Q86UD7 250 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 SUMF2Q8NBJ7 301 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 BPIFCQ8NFQ6 507 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 PPP1R35Q8TAP8 253 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 GMPPAQ96IJ6 420 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 RTBDNQ9BSG5 229 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 CEP192Q8TEP8 1941 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 DOCK10Q96BY6 2186 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 IGKV1-12A0A0C4DH73 117 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 RPL36A-HNRNPH2H7BZ11 118 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TOR1AO14656 332 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 IGKV1D-12P01611 117 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 SELEP16581 610 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 RCC1P18754 421 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 ZNF528Q3MIS6 628 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 PEAR1Q5VY43 1037 aaPredicted RBP8.75□□□□□ -1.01
MCF2-209ENST00000520602 LIAT1Q6ZQX7 453 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 FAM89BQ8N5H3 189 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 OR2Z1Q8NG97 314 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 OR1K1Q8NGR3 316 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 RNF138Q8WVD3 245 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TMEM45BQ96B21 275 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 TM2D1Q9BX74 207 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 PLEKHF2Q9H8W4 249 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 OSGIN2Q9Y236 505 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 FAM96BQ9Y3D0 163 aa8.75□□□□□ -1.01
MCF2-209ENST00000520602 FAM24AA6NFZ4 105 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 ZNF891A8MT65 544 aaPredicted RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 ZNF724A8MTY0 619 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 C3orf80F5H4A9 247 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 H7C1Q1 480 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 OR2A2Q6IF42 318 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 FAM214BQ7L5A3 538 aa8.74□□□□□ -1.01
MCF2-209ENST00000520602 ZFP62Q8NB50 900 aaPredicted RBP8.74□□□□□ -1.01
MCF2-209ENST00000520602 OR2G3Q8NGZ4 309 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms