RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 TBL2Q9Y4P3 447 aaKnown RBP2.56□□□□□ -2
SQLE-204ENST00000520493 ABCC11Q96J66 1382 aa2.56□□□□□ -2
SQLE-204ENST00000520493 RIMS2Q9UQ26 1411 aa2.56□□□□□ -2
SQLE-204ENST00000520493 MYO15BQ96JP2 1530 aa2.56□□□□□ -2
SQLE-204ENST00000520493 IGHV3-49A0A0A0MS15 119 aa2.55□□□□□ -2
SQLE-204ENST00000520493 DAPL1A0PJW8 107 aa2.55□□□□□ -2
SQLE-204ENST00000520493 C5orf63A6NC05 138 aa2.55□□□□□ -2
SQLE-204ENST00000520493 TMEM210A6NLX4 147 aa2.55□□□□□ -2
SQLE-204ENST00000520493 C9JQL5 133 aa2.55□□□□□ -2
SQLE-204ENST00000520493 LRRN3E7EW58 273 aa2.55□□□□□ -2
SQLE-204ENST00000520493 H0Y980 276 aa2.55□□□□□ -2
SQLE-204ENST00000520493 M0QZ92 97 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ZNF207O43670 478 aaKnown RBP2.55□□□□□ -2
SQLE-204ENST00000520493 SSNA1O43805 119 aa2.55□□□□□ -2
SQLE-204ENST00000520493 OR2A4O95047 310 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MAS1P04201 325 aa2.55□□□□□ -2
SQLE-204ENST00000520493 CD74P04233 296 aa2.55□□□□□ -2
SQLE-204ENST00000520493 C1GALT1C1LP0DN25 315 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MAGP20916 626 aa2.55□□□□□ -2
SQLE-204ENST00000520493 NOS1P29475 1434 aa2.55□□□□□ -2
SQLE-204ENST00000520493 RCVRNP35243 200 aa2.55□□□□□ -2
SQLE-204ENST00000520493 CD79BP40259 229 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ACTR1BP42025 376 aa2.55□□□□□ -2
SQLE-204ENST00000520493 CXCL12P48061 93 aa2.55□□□□□ -2
SQLE-204ENST00000520493 PSMD7P51665 324 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MEF2CQ06413 473 aaPredicted RBP2.55□□□□□ -2
SQLE-204ENST00000520493 MLLT11Q13015 90 aaPredicted RBP2.55□□□□□ -2
SQLE-204ENST00000520493 FAM53BQ14153 422 aa2.55□□□□□ -2
SQLE-204ENST00000520493 SSX1Q16384 188 aa2.55□□□□□ -2
SQLE-204ENST00000520493 BCL2A1Q16548 175 aa2.55□□□□□ -2
SQLE-204ENST00000520493 DNAL1Q4LDG9 190 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MIA3Q5JRA6 1907 aa2.55□□□□□ -2
SQLE-204ENST00000520493 UBE2NLQ5JXB2 153 aa2.55□□□□□ -2
SQLE-204ENST00000520493 C9orf84Q5VXU9 1444 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MORN3Q6PF18 240 aaPredicted RBP2.55□□□□□ -2
SQLE-204ENST00000520493 SPNS3Q6ZMD2 512 aa2.55□□□□□ -2
SQLE-204ENST00000520493 PRNTQ86SH4 94 aa2.55□□□□□ -2
SQLE-204ENST00000520493 GALNT10Q86SR1 603 aa2.55□□□□□ -2
SQLE-204ENST00000520493 NT5DC3Q86UY8 548 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ORMDL3Q8N138 153 aa2.55□□□□□ -2
SQLE-204ENST00000520493 MUC15Q8N387 334 aa2.55□□□□□ -2
SQLE-204ENST00000520493 SLC25A45Q8N413 288 aa2.55□□□□□ -2
SQLE-204ENST00000520493 OR4P4Q8NGL7 312 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ZNF285Q96NJ3 590 aa2.55□□□□□ -2
SQLE-204ENST00000520493 OR2A7Q96R45 310 aa2.55□□□□□ -2
SQLE-204ENST00000520493 DHRS9Q9BPW9 319 aa2.55□□□□□ -2
SQLE-204ENST00000520493 NDFIP1Q9BT67 221 aa2.55□□□□□ -2
SQLE-204ENST00000520493 SLC25A31Q9H0C2 315 aa2.55□□□□□ -2
SQLE-204ENST00000520493 OR51E2Q9H255 320 aa2.55□□□□□ -2
SQLE-204ENST00000520493 METTL17Q9H7H0 456 aaPredicted RBP2.55□□□□□ -2
SQLE-204ENST00000520493 ZNF355PQ9NSJ1 428 aa2.55□□□□□ -2
SQLE-204ENST00000520493 FGFR1OP2Q9NVK5 253 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ENOPH1Q9UHY7 261 aa2.55□□□□□ -2
SQLE-204ENST00000520493 ZNF222Q9UK12 451 aa2.55□□□□□ -2
SQLE-204ENST00000520493 CDC42BPBQ9Y5S2 1711 aa2.55□□□□□ -2
SQLE-204ENST00000520493 SETD1AO15047 1707 aaKnown RBP2.54□□□□□ -2
SQLE-204ENST00000520493 TRAV8-3A0A0A6YYJ7 113 aa2.54□□□□□ -2
SQLE-204ENST00000520493 IGHV2-26A0A0B4J1V2 119 aa2.54□□□□□ -2
SQLE-204ENST00000520493 CENPVL3A0A0U1RRI6 287 aa2.54□□□□□ -2
SQLE-204ENST00000520493 TINCRA0A1B0GVN0 87 aa2.54□□□□□ -2
SQLE-204ENST00000520493 A8MWL6 223 aa2.54□□□□□ -2
SQLE-204ENST00000520493 GOLGA6L19H0YKK7 550 aa2.54□□□□□ -2
SQLE-204ENST00000520493 STX10O60499 249 aa2.54□□□□□ -2
SQLE-204ENST00000520493 IGLV3-25P01717 112 aa2.54□□□□□ -2
SQLE-204ENST00000520493 CISD3P0C7P0 127 aa2.54□□□□□ -2
SQLE-204ENST00000520493 NQO1P15559 274 aaKnown RBP2.54□□□□□ -2
SQLE-204ENST00000520493 SPNP16150 400 aa2.54□□□□□ -2
SQLE-204ENST00000520493 UGT2B7P16662 529 aa2.54□□□□□ -2
SQLE-204ENST00000520493 IL1RNP18510 177 aa2.54□□□□□ -2
SQLE-204ENST00000520493 NELFEP18615 380 aaKnown RBP2.54□□□□□ -2
SQLE-204ENST00000520493 M6PRP20645 277 aa2.54□□□□□ -2
SQLE-204ENST00000520493 OPRK1P41145 380 aa2.54□□□□□ -2
SQLE-204ENST00000520493 NKX2-5P52952 324 aaPredicted RBP2.54□□□□□ -2
SQLE-204ENST00000520493 CEBPGP53567 150 aa2.54□□□□□ -2
SQLE-204ENST00000520493 MADCAM1Q13477 382 aa2.54□□□□□ -2
SQLE-204ENST00000520493 PAFAH1B3Q15102 231 aaKnown RBP2.54□□□□□ -2
SQLE-204ENST00000520493 UAP1Q16222 522 aaPredicted RBP2.54□□□□□ -2
SQLE-204ENST00000520493 C4orf26Q17RF5 130 aa2.54□□□□□ -2
SQLE-204ENST00000520493 HLA-DRB5Q30154 266 aa2.54□□□□□ -2
SQLE-204ENST00000520493 SAPCD1Q5SSQ6 148 aa2.54□□□□□ -2
SQLE-204ENST00000520493 SAXO2Q658L1 398 aa2.54□□□□□ -2
SQLE-204ENST00000520493 Q6P435 159 aa2.54□□□□□ -2
SQLE-204ENST00000520493 IGFL2Q6UWQ7 119 aa2.54□□□□□ -2
SQLE-204ENST00000520493 CASP12Q6UXS9 341 aa2.54□□□□□ -2
SQLE-204ENST00000520493 CPNE9Q8IYJ1 553 aa2.54□□□□□ -2
SQLE-204ENST00000520493 ZNF555Q8NEP9 628 aa2.54□□□□□ -2
SQLE-204ENST00000520493 OR5T1Q8NG75 326 aa2.54□□□□□ -2
SQLE-204ENST00000520493 OR6K3Q8NGY3 331 aa2.54□□□□□ -2
SQLE-204ENST00000520493 PIGXQ8TBF5 258 aa2.54□□□□□ -2
SQLE-204ENST00000520493 C17orf50Q8WW18 174 aa2.54□□□□□ -2
SQLE-204ENST00000520493 PTH2Q96A98 100 aa2.54□□□□□ -2
SQLE-204ENST00000520493 CHMP6Q96FZ7 201 aa2.54□□□□□ -2
SQLE-204ENST00000520493 YPEL4Q96NS1 127 aa2.54□□□□□ -2
SQLE-204ENST00000520493 TBL1YQ9BQ87 522 aa2.54□□□□□ -2
SQLE-204ENST00000520493 HRASLSQ9HDD0 168 aa2.54□□□□□ -2
SQLE-204ENST00000520493 DMAC2Q9NW81 257 aa2.54□□□□□ -2
SQLE-204ENST00000520493 RBM12B-AS1Q9P1G2 102 aa2.54□□□□□ -2
SQLE-204ENST00000520493 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.54□□□□□ -2
SQLE-204ENST00000520493 CUL9Q8IWT3 2517 aa2.53□□□□□ -2
SQLE-204ENST00000520493 TNS2Q63HR2 1409 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms