RNA–Protein interactions for RNA: ENST00000520168.5

SDCBP-207, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-207ENST00000520168 ERVFRD-1P60508 538 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RPL23AP62750 156 aaKnown RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 HIST1H3AP68431 136 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RIPPLY1Q0D2K3 151 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 TBCEQ15813 527 aaPredicted RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 BAK1Q16611 211 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 KRTAP27-1Q3LI81 207 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 YIF1BQ5BJH7 314 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 HIST2H3PS2Q5TEC6 136 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 STEAP3Q658P3 488 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 KCTD8Q6ZWB6 473 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 HIST2H3AQ71DI3 136 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM179BQ7Z7N9 219 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 TMEM219Q86XT9 240 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CALHM1Q8IU99 346 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OFCC1Q8IZS5 231 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OSR2Q8N2R0 312 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 FTMTQ8N4E7 242 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 LINC00471Q8N535 108 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 CYB561A3Q8NBI2 242 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OR4C15Q8NGM1 316 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OR5M8Q8NGP6 311 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OR6Q1Q8NGQ2 317 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OR13D1Q8NGV5 346 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 OR8S1Q8NH09 359 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 LRRC20Q8TCA0 184 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 LRRC29Q8WV35 223 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 SLAMF9Q96A28 289 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RBMXL1Q96E39 390 aaKnown RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 P2RX4Q99571 388 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 PITX2Q99697 317 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ATF6BQ99941 703 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 PRSS27Q9BQR3 290 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 WFDC6Q9BQY6 131 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 GABARAPL3Q9BY60 117 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RBM38Q9H0Z9 239 aaKnown RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 WDR76Q9H967 626 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 EDA2RQ9HAV5 297 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ABCB9Q9NP78 766 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 VNN3Q9NY84 501 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 HAO2Q9NYQ3 351 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 RSL24D1Q9UHA3 163 aaKnown RBP3.89□□□□□ -1.79
SDCBP-207ENST00000520168 MED31Q9Y3C7 131 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 GMPPBQ9Y5P6 360 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 ENPP4Q9Y6X5 453 aa3.89□□□□□ -1.79
SDCBP-207ENST00000520168 KMT2AQ03164 3969 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 A0A0A6YYH2 397 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 IGLV1-36A0A0B4J1U3 117 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 A0A0B4J293 547 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 A0A1B0GW55 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 FUOMA2VDF0 154 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 PRSS37A4D1T9 235 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 GGT3PA6NGU5 568 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 A6NJ64 397 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ANKRD30BLA7E2S9 258 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 M0QZK8 103 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 SLC1A7O00341 560 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 SLC33A1O00400 549 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 MPZL2O60487 215 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 KHDRBS3O75525 346 aaKnown RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 GADD45GO95257 159 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 RBP4P02753 201 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 LCATP04180 440 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 CRYGCP07315 174 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ACAA1P09110 424 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ACSM4P0C7M7 580 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L2P0CJ85 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L3P0CJ86 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L4P0CJ87 422 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L5P0CJ88 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L6P0CJ89 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L7P0CJ90 424 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 PGA5P0DJD9 388 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 CTLA4P16410 223 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DCKP27707 260 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 AQP1P29972 269 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 POLR2IP36954 125 aaKnown RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 IFNGR2P38484 337 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 CAPZA1P52907 286 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 SLC25A1P53007 311 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 CRYBA2P53672 197 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 TPTEP56180 551 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 OR12D2P58182 307 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 TAS2R41P59536 307 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 HOXA4Q00056 320 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 PRB3Q04118 309 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUSP7Q16829 419 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 TEX30Q5JUR7 227 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DNM1P34Q6PK57 102 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DUX4L9Q6RFH8 374 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 WDR82Q6UXN9 313 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 CD300LDQ6UXZ3 194 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ZNF826PQ6ZT77 177 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 DPY19L4Q7Z388 723 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 OR2W3Q7Z3T1 314 aa3.88□□□□□ -1.79
SDCBP-207ENST00000520168 TSEN54Q7Z6J9 526 aaKnown RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.88□□□□□ -1.79
SDCBP-207ENST00000520168 SBSPONQ8IVN8 264 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms