RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 STAG3L2P0CL84 134 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GGT1P19440 569 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CCNG1P51959 295 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 TGFBR3Q03167 851 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF763Q0D2J5 394 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRAM2Q15035 370 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GUSBP1Q15486 140 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR52W1Q6IF63 320 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 C1orf94Q6P1W5 598 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SSX8Q7RTT4 187 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM220AQ7Z4H9 259 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SBSPONQ8IVN8 264 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRR22Q8IZ63 422 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 C6orf223Q8N319 242 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RIBC1Q8N443 379 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MORN4Q8NDC4 146 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR9G1Q8NH87 305 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF502Q8TBZ5 544 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CAPSLQ8WWF8 208 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAB8BQ92930 207 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 CERS2Q96G23 380 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MAGEB18Q96M61 343 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 HBEGFQ99075 208 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 EBNA1BP2Q99848 306 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 RARRES2Q99969 163 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 NRIP2Q9BQI9 281 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 SIKE1Q9BRV8 207 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACTR3CQ9C0K3 210 aaPredicted RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 GFRA4Q9GZZ7 299 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 OR51J1Q9H342 316 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 AHSPQ9NZD4 102 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 PTTG3PQ9NZH4 202 aa3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 MYEF2Q9P2K5 600 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZMAT5Q9UDW3 170 aaKnown RBP3.4□□□□□ -1.87
HMGB1P23-201ENST00000518743 A0A1W2PPV4 95 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CIB4A0PJX0 185 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF879B4DU55 563 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 hCG_2039718K7EN88 272 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 AIREO43918 545 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SS18L1O75177 396 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CBR3O75828 277 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CSTAP01040 98 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINA5P05154 406 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINE2P07093 398 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ADRA2AP08913 450 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 INAFM2P0DMQ5 153 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SERPINB5P36952 375 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RPS15AP62244 130 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PPIDQ08752 370 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 STX4Q12846 297 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PDIA2Q13087 525 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF658BQ4V348 819 aaPredicted RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A1Q5HYN5 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TIMM23BQ5SRD1 257 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CNIH2Q6PI25 160 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 BRD3OSQ6XYD6 125 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CMTM1Q8IZ96 169 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM86BQ8N661 226 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRIML2Q8N7C3 387 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 GATSQ8NAP1 163 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CT45A3Q8NHU0 189 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RAD51AP1Q96B01 352 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRIB3Q96RU7 358 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TSG101Q99816 390 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 SNRNP25Q9BV90 132 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PIGUQ9H490 435 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 TRABDQ9H4I3 376 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 C16orf95Q9H693 158 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 RNF167Q9H6Y7 350 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 PRTFDC1Q9NRG1 225 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 XCL2Q9UBD3 114 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 MCTS1Q9ULC4 181 aaKnown RBP3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 MMACHCQ9Y4U1 282 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 CDH10Q9Y6N8 788 aa3.39□□□□□ -1.87
HMGB1P23-201ENST00000518743 IGKV1-8A0A0C4DH67 115 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 GOLGA8QA0A0J9YX86 632 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ISPDA4D126 451 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 GOLGA8RI6L899 631 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 M0QX08 132 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 XKRYO14609 159 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 XRCC2O43543 280 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 FCN3O75636 299 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 HSPB1P04792 205 aaKnown RBP3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 P0C879 139 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 AGTR1P30556 359 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 AQP2P41181 271 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 STX17P56962 302 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ACVR1Q04771 509 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 SLAMF1Q13291 335 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 BCL2A1Q16548 175 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 NIPAL1Q6NVV3 410 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 VN1R4Q7Z5H5 301 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 P2RY8Q86VZ1 359 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 KRTAP7-1Q8IUC3 87 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 FAM58AQ8N1B3 248 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 ZNF485Q8NCK3 441 aa3.38□□□□□ -1.87
HMGB1P23-201ENST00000518743 TMEM104Q8NE00 496 aa3.38□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms