RNA–Protein interactions for RNA: ENST00000516146.1

RNU6-27P-201, Transcript of RNA, U6 small nuclear 27, pseudogene, humanhuman

BASIC

Gene RNU6-27P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-27P-201ENST00000516146 METTL9Q9H1A3 318 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 POMKQ9H5K3 350 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 CA10Q9NS85 328 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 PLEKHJ1Q9NW61 149 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 DMAC2Q9NW81 257 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 TAC3Q9UHF0 121 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 SCN4AP35499 1836 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 BRWD3Q6RI45 1802 aa2.38□□□□□ -2.03
RNU6-27P-201ENST00000516146 POLR3AO14802 1390 aaPredicted RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 DAPL1A0PJW8 107 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CEACAM18A8MTB9 384 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CCRL2O00421 344 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 GPR171O14626 319 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 FFAR1O14842 300 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZW10O43264 779 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 OR7C2O60412 319 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 AHSA1O95433 338 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 PSMG1O95456 288 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CXorf1O96002 111 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 APOEP02649 317 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 IL4P05112 153 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 SOD3P08294 240 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 NPY1RP25929 384 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 IMPA1P29218 277 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 ACTR1BP42025 376 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CMC4P56277 68 aaPredicted RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 PFN3P60673 137 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 MAGOHP61326 146 aaKnown RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CDC20Q12834 499 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 CDKL4Q5MAI5 379 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 FAM222AQ5U5X8 452 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 NXNL2Q5VZ03 156 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 GLYATQ6IB77 296 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 Q6P435 159 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 TTC33Q6PID6 262 aaPredicted RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 NT5DC3Q86UY8 548 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 BLIDQ8IZY5 108 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 GATD1Q8NB37 220 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZNF555Q8NEP9 628 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 OR52E4Q8NGH9 312 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 OR4P4Q8NGL7 312 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 STOML3Q8TAV4 291 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 DERL3Q96Q80 235 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 SDHCQ99643 169 aaPredicted RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 SLC19A3Q9BZV2 496 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 NSRP1Q9H0G5 558 aaKnown RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZSCAN16Q9H4T2 348 aaPredicted RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 KLK12Q9UKR0 248 aa2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 C14orf166Q9Y224 244 aaKnown RBP2.37□□□□□ -2.03
RNU6-27P-201ENST00000516146 PRRC2AP48634 2157 aaKnown RBP2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 TNS2Q63HR2 1409 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 IGKV1-6A0A0C4DH72 117 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 LGALS9O00182 355 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 SLC16A4O15374 487 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 MAGEB4O15481 346 aaPredicted RBP2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 SSNA1O43805 119 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 CA2P00918 260 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 IGKV1-39P01597 117 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 IGKV1D-39P04432 117 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 CELP19835 753 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 HLA-DMAP28067 261 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 SLC6A1P30531 599 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 BLVRAP53004 296 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 COX19Q49B96 90 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 PDZD11Q5EBL8 140 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 KHDRBS2Q5VWX1 349 aaKnown RBP2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 PRSS54Q6PEW0 395 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 OLIG3Q7RTU3 272 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 MTERF4Q7Z6M4 381 aaKnown RBP2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZNF101Q8IZC7 436 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 SLC25A45Q8N413 288 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 LINC01587Q99440 93 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 THTPAQ9BU02 230 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 C1orf50Q9BV19 199 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 OR51E2Q9H255 320 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 SND1-IT1Q9HBX3 110 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 RBM12B-AS1Q9P1G2 102 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 ADCY9O60503 1353 aa2.36□□□□□ -2.03
RNU6-27P-201ENST00000516146 IGHV2-26A0A0B4J1V2 119 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 C7orf66A4D0T2 115 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 GMNCA6NCL1 334 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 SMIM23A6NLE4 172 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZNF850A8MQ14 1090 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 BTNL10A8MVZ5 291 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 TCF21O43680 179 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 STX10O60499 249 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 CNMDO75829 334 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 SEC11BP0C7V7 166 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 PSKH1P11801 424 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 MUC1P15941 1255 aaPredicted RBP2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 HSPA13P48723 471 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 GTF2BQ00403 316 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 ZNF816Q0VGE8 651 aaPredicted RBP2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 PAFAH1B3Q15102 231 aaKnown RBP2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 TBC1D28Q2M2D7 210 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 LINC00483Q53H64 154 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 FAM104BQ5XKR9 115 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 DNM1P34Q6PK57 102 aa2.35□□□□□ -2.03
RNU6-27P-201ENST00000516146 UNQ9165/PRO28630Q6UXU0 137 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms