RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 ZNF738Q8NE65 137 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 OR1N1Q8NGS0 311 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 OR10AC1Q8NH08 325 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 MISP3Q96FF7 219 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 RNF2Q99496 336 aa11.77□□□□□ -0.53
TCOF1-214ENST00000515035 PTPRZ1P23471 2315 aaPredicted RBP11.77□□□□□ -0.53
TCOF1-214ENST00000515035 SOCS1O15524 211 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 DEDDO75618 318 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 CXCL2P19875 107 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 G6PCP35575 357 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 GPR3P46089 330 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 GPR27Q9NS67 375 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF107Q9UII5 783 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 IGLV3-16A0A075B6K0 115 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SP1P08047 785 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 PGA4P0DJD7 388 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 PGA5P0DJD9 388 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 TMEM255AQ5JRV8 349 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SPTY2D1-AS1A0A0U1RR47 76 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 FFAR1O14842 300 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 PAGE4O60829 102 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SLC35E3Q7Z769 313 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 VASH2Q86V25 355 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 LINC00518Q8N0U6 118 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 LILRB1Q8NHL6 650 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 OR2A5Q96R48 311 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 OR51M1Q9H341 326 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 FRRS1LQ9P0K9 344 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SHROOM3Q8TF72 1996 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 ALG1L2C9J202 215 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SIAH2O43255 324 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MPZL1O95297 269 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MELTFP08582 738 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MUC1P15941 1255 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MDKP21741 143 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 Q56UQ5 140 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF774Q6NX45 483 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 C8orf82Q6P1X6 216 aaPredicted RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 FDX2Q6P4F2 183 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MOB3BQ86TA1 216 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 FAM219AQ8IW50 185 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 SARAFQ96BY9 339 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 MOGAT1Q96PD6 335 aa11.76□□□□□ -0.53
TCOF1-214ENST00000515035 RCC2Q9P258 522 aaKnown RBP11.76□□□□□ -0.53
TCOF1-214ENST00000515035 A0A1W2PR80 420 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 LILRA5A6NI73 299 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 IFITM10A6NMD0 228 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 DSCR4P56555 118 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ANKRD55Q3KP44 614 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 TMEM91Q6ZNR0 172 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 MRPL30Q8TCC3 161 aaKnown RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ATG101Q9BSB4 218 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 PPP1R3EQ9H7J1 279 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 TECRQ9NZ01 308 aaKnown RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 OR2T8A6NH00 312 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 F5H697 171 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 CORTO00230 105 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ACTL6AO96019 429 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 POU2F2P09086 479 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 RGS7BPQ6MZT1 257 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 MDH2P40926 338 aaKnown RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 PCP4P48539 62 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 OR4C12Q96R67 309 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ICE1Q9Y2F5 2266 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 TTC3P53804 2025 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 SLC22A20A6NK97 555 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 SIGLEC5O15389 551 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 TNFSF15O95150 251 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF32P17041 273 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 MEOX1P50221 254 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 FAM3BP58499 235 aaPredicted RBP11.75□□□□□ -0.53
TCOF1-214ENST00000515035 SIGLEC14Q08ET2 396 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 OR4A47Q6IF82 309 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 GHITMQ9H3K2 345 aa11.75□□□□□ -0.53
TCOF1-214ENST00000515035 ADAMTS7Q9UKP4 1686 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 CDK2AP1O14519 115 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 CA6P23280 308 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 GNG10P50151 68 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 MICBQ29980 383 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 KHDC3LQ587J8 217 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 SLC25A30Q5SVS4 291 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 WDR34Q96EX3 536 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 IL36GQ9NZH8 169 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 RHBDL1O75783 438 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 ANKRD34CP0C6C1 535 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 PSG5Q15238 335 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 WFDC8Q8IUA0 241 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 D2HGDHQ8N465 521 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 ADAD2Q8NCV1 583 aaKnown RBP11.74□□□□□ -0.53
TCOF1-214ENST00000515035 HSD17B10Q99714 261 aaKnown RBP11.74□□□□□ -0.53
TCOF1-214ENST00000515035 STARD10Q9Y365 291 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.74□□□□□ -0.53
TCOF1-214ENST00000515035 CDS2O95674 445 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 RCC1P18754 421 aaPredicted RBP11.74□□□□□ -0.53
TCOF1-214ENST00000515035 ORM2P19652 201 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 ATP6V0CP27449 155 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 DDTP30046 118 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 CD226Q15762 336 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 C5orf17Q8NAS9 161 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 AURKAIP1Q9NWT8 199 aaPredicted RBP11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms