RNA–Protein interactions for RNA: ENST00000513989.5

NEDD9-214, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 4

Gene NEDD9, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-214ENST00000513989 BARHL1Q9BZE3 327 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 C6orf62Q9GZU0 229 aaPredicted RBP8.48□□□□□ -1.05
NEDD9-214ENST00000513989 FAM234AQ9H0X4 552 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 IFT22Q9H7X7 185 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 PLEKHJ1Q9NW61 149 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 DCAF16Q9NXF7 216 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 KAAG1Q9UBP8 84 aa8.48□□□□□ -1.05
NEDD9-214ENST00000513989 IGKV1D-17A0A075B6S4 117 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 IGHV4-30-2A0A087WSY4 118 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 A0A1W2PP11 408 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 CEACAM18A8MTB9 384 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 KIAA1324LA8MWY0 1029 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 VWC2LB2RUY7 222 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 FAM25AB3EWG3 89 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 FAM25CB3EWG5 89 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 FAM25GB3EWG6 89 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 TNFRSF13BO14836 293 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 SIGLEC5O15389 551 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 ECDO95905 644 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 WNT2P09544 360 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 LMO1P25800 156 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 BLVRBP30043 206 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 VEGFCP49767 419 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 COL10A1Q03692 680 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 KRTAP1-1Q07627 177 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 UNC119Q13432 240 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 ESCO2Q56NI9 601 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 PAN3Q58A45 887 aaKnown RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 FOXB2Q5VYV0 432 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 ZNF788Q6ZQV5 615 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 CD177Q8N6Q3 437 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 ASCC1Q8N9N2 400 aaKnown RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 NEK7Q8TDX7 302 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 C15orf40Q8WUR7 153 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 RAB3CQ96E17 227 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 SEH1LQ96EE3 360 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 MDFIQ99750 246 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 REG4Q9BYZ8 158 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 LPAR5Q9H1C0 372 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 ABCG5Q9H222 651 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 NARFLQ9H6Q4 476 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 PATZ1Q9HBE1 687 aaKnown RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 RHBDL2Q9NX52 303 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 RABL2AQ9UBK7 228 aaPredicted RBP8.47□□□□□ -1.05
NEDD9-214ENST00000513989 CLN8Q9UBY8 286 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 RABL2BQ9UNT1 228 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 PEX16Q9Y5Y5 336 aa8.47□□□□□ -1.05
NEDD9-214ENST00000513989 K7N7A8 449 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 SIRPB1O00241 398 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 MGST3O14880 152 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 PDCD6O75340 191 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 CA11O75493 328 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 TK1P04183 234 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 NDUFB7P17568 137 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 MNDAP41218 407 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 GNB2P62879 340 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 PDCD1Q15116 288 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 GRK1Q15835 563 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 Q6P435 159 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 GDPD3Q7L5L3 318 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 SUMF2Q8NBJ7 301 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM185AQ8NFB2 350 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 OR5H6Q8NGV6 325 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 OR10R2Q8NGX6 335 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 NUDT16L1Q9BRJ7 211 aaKnown RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 DPCDQ9BVM2 203 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 SLIRPQ9GZT3 109 aaKnown RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 NXF2Q9GZY0 626 aaKnown RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 RIMS4Q9H426 269 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 SLC25A10Q9UBX3 287 aaPredicted RBP8.46□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF222Q9UK12 451 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 HSF4Q9ULV5 492 aa8.46□□□□□ -1.06
NEDD9-214ENST00000513989 ARFGEF3Q5TH69 2177 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 MALRD1Q5VYJ5 2156 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 TRAV24A0A0B4J272 114 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 A0A1W2PPH5 198 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 SLC33A1O00400 549 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-214ENST00000513989 DVL1O14640 695 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 SMAD7O15105 426 aaKnown RBP8.45□□□□□ -1.06
NEDD9-214ENST00000513989 XRCC3O43542 346 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 HPGDSO60760 199 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 FOXH1O75593 365 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 CLPXO76031 633 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 TPPPO94811 219 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 IGHV2-5P01817 119 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 EFNB2P52799 333 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 HOXA4Q00056 320 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-214ENST00000513989 LOXL1Q08397 574 aaPredicted RBP8.45□□□□□ -1.06
NEDD9-214ENST00000513989 CNPY1Q3B7I2 92 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 CDNFQ49AH0 187 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 NKAPLQ5M9Q1 402 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 TMEM69Q5SWH9 247 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 LYPD2Q6UXB3 125 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 CMTM4Q8IZR5 234 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 ZNF565Q8N9K5 539 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 ZNRF1Q8ND25 227 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 CLDND2Q8NHS1 167 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 ST8SIA4Q92187 359 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 GAFA1Q96PS6 74 aa8.45□□□□□ -1.06
NEDD9-214ENST00000513989 SSBP3Q9BWW4 388 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms