RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 hADV38S2A0JD32 116 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 VGLL3A8MV65 326 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 MYL12BO14950 172 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 MAGEB3O15480 346 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 IGHV4-59P01825 116 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 FBP1P09467 338 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 OCMP0CE72 109 aaPredicted RBP7.89□□□□□ -1.15
RNF4-221ENST00000513643 IGHV1-8P0DP01 117 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 EEF1B2P24534 225 aaKnown RBP7.89□□□□□ -1.15
RNF4-221ENST00000513643 FOXL1Q12952 345 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 INSL4Q14641 139 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 GRK1Q15835 563 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 TAF9Q16594 264 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 AWAT1Q58HT5 328 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 GDPD3Q7L5L3 318 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 PRSS48Q7RTY5 328 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 MS4A15Q8N5U1 240 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 TPRX1Q8N7U7 411 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 PPP1R35Q8TAP8 253 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 TNFAIP8L1Q8WVP5 186 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 GCDHQ92947 438 aaPredicted RBP7.89□□□□□ -1.15
RNF4-221ENST00000513643 CHST6Q9GZX3 395 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 PPIL3Q9H2H8 161 aaKnown RBP7.89□□□□□ -1.15
RNF4-221ENST00000513643 GLS2Q9UI32 602 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 UBE2J1Q9Y385 318 aaPredicted RBP7.89□□□□□ -1.15
RNF4-221ENST00000513643 TPRKBQ9Y3C4 175 aa7.89□□□□□ -1.15
RNF4-221ENST00000513643 KIAA2026Q5HYC2 2103 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 A0A087X0M5 115 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 A0A1B0GX30 115 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 hCG_1809904A0A1W2PP81 198 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PPE2 198 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PR64 198 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PRV1 198 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 FAM181BA6NEQ2 426 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 SIRPB1O00241 398 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 DEGS1O15121 323 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 DENRO43583 198 aaKnown RBP7.88□□□□□ -1.15
RNF4-221ENST00000513643 MMP23AO75900 390 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 CDRT1O95170 752 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 NDUFA7O95182 113 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 GABRR1P24046 479 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 CFPP27918 469 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 VHLP40337 213 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 GLIPR1P48060 266 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 EDDM3BP56851 147 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 PPP3R1P63098 170 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ACSM3Q53FZ2 586 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 DDI2Q5TDH0 399 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZNF626Q68DY1 528 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 HEPN1Q6WQI6 88 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 TMEM91Q6ZNR0 172 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 LRRTM1Q86UE6 522 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 DYRK2Q92630 601 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 THRSPQ92748 146 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZDHHC16Q969W1 377 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZNF714Q96N38 554 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZNF184Q99676 751 aaPredicted RBP7.88□□□□□ -1.15
RNF4-221ENST00000513643 NKX3-1Q99801 234 aaPredicted RBP7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZNF747Q9BV97 191 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 TAS2R3Q9NYW6 316 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 C1RLQ9NZP8 487 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 ZNF581Q9P0T4 197 aa7.88□□□□□ -1.15
RNF4-221ENST00000513643 PNMA8CA0A1B0GUJ8 204 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 A0A1W2PPK0 400 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 ODAMA1E959 279 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 MEIOCA2RUB1 952 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 POM121CA8CG34 1229 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 NPIPB11E5RHQ5 1161 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 RGS10O43665 173 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 ZNF780AO75290 641 aaPredicted RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 UCHL1P09936 223 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 CPEP16870 476 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 MAPK3P27361 379 aaPredicted RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 CD34P28906 385 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 KCNJ3P48549 501 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 RBM11P57052 281 aaKnown RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 ACTG1P63261 375 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 AESQ08117 197 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 MLLT11Q13015 90 aaPredicted RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 C17orf58Q2M2W7 97 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 PIGYQ3MUY2 71 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 RBM48Q5RL73 367 aaKnown RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 C1orf100Q5SVJ3 147 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 RSBN1Q5VWQ0 802 aaPredicted RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 C12orf54Q6X4T0 127 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 LINC00596Q86U02 117 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 SATL1Q86VE3 508 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 DYNAPQ8N1N2 210 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 GAPTQ8N292 157 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 OSR2Q8N2R0 312 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 OR4D6Q8NGJ1 314 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 OR10K1Q8NGX5 313 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 PHYHIPQ92561 330 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 TAF15Q92804 592 aaKnown RBP eCLIP7.87□□□□□ -1.156e-6■■■■□ 22
RNF4-221ENST00000513643 MRPS24Q96EL2 167 aaKnown RBP7.87□□□□□ -1.15
RNF4-221ENST00000513643 GPER1Q99527 375 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 UQCC2Q9BRT2 126 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 METTL9Q9H1A3 318 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 PPA2Q9H2U2 334 aa7.87□□□□□ -1.15
RNF4-221ENST00000513643 DPAGT1Q9H3H5 408 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms