RNA–Protein interactions for RNA: ENST00000513346.5

TCOF1-211, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-211ENST00000513346 CYB5R3P00387 301 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 MT-CO3P00414 261 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 IL2RAP01589 272 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 PGA4P0DJD7 388 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 PGA5P0DJD9 388 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 CRISP2P16562 243 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 CYB5R2Q6BCY4 276 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF880Q6PDB4 577 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 DPPA3Q6W0C5 159 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 BHLHE23Q8NDY6 225 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 DYRK2Q92630 601 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 KISS1RQ969F8 398 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 SPACA9Q96E40 222 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 CES1P1Q9UKY3 287 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 J3QR89 54 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 DEDDO75618 318 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 NXPH2O95156 264 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 TRGC1P0CF51 173 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 MDKP21741 143 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 TMEM267Q0VDI3 215 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 TBC1D28Q2M2D7 210 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF260Q3ZCT1 412 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 GTF2H5Q6ZYL4 71 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 DEFB124Q8NES8 71 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 OR2I1PQ8NGU4 316 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 C22orf15Q8WYQ4 148 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ROBO4Q8WZ75 1007 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 NEIL1Q96FI4 390 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ATP5SQ99766 215 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF552Q9H707 407 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 LIN7CQ9NUP9 197 aaKnown RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 MTCH1Q9NZJ7 389 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 CACFD1Q9UGQ2 172 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 PPP1R3CQ9UQK1 317 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 TGIF2-C20orf24A0A0A6YYL0 155 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 SIAH2O43255 324 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 MPZL1O95297 269 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 HSPB1P04792 205 aaKnown RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 FUT3P21217 361 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 PTGER4P35408 488 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 FAM3BP58499 235 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 TRIP6Q15654 476 aaKnown RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 LTC4SQ16873 150 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 MRGPRGQ86SM5 289 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ADGRG7Q96K78 797 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 CIB3Q96Q77 187 aaPredicted RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 LANCL2Q9NS86 450 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 GNG12Q9UBI6 72 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 PAM16Q9Y3D7 125 aa9.93□□□□□ -0.82
TCOF1-211ENST00000513346 RBBP6Q7Z6E9 1792 aaKnown RBP9.93□□□□□ -0.82
TCOF1-211ENST00000513346 ARID2Q68CP9 1835 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 UPK3AO75631 287 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CELA2BP08218 269 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 EDN3P14138 238 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 MMP16P51512 607 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 LYZL2Q7Z4W2 148 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 ZAR1Q86SH2 424 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 FBXL14Q8N1E6 418 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 OR1L3Q8NH93 324 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 APOBEC4Q8WW27 367 aaKnown RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SPSB1Q96BD6 273 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 RBM14Q96PK6 669 aaKnown RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 C5orf52A6NGY3 159 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 FCN1O00602 326 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SPRY1O43609 319 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SOX15O60248 233 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CBR3O75828 277 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 ZNF117Q03924 483 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 IL11RAQ14626 422 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 TSPO2Q5TGU0 170 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 KCNE4Q8WWG9 221 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 RIMS4Q9H426 269 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SCN3AQ9NY46 2000 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CDS2O95674 445 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 FSTP19883 344 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 ATG4DQ86TL0 474 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 OR5AU1Q8NGC0 362 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 OR10C1Q96KK4 312 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 OXGR1Q96P68 337 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SOX7Q9BT81 388 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SLC2A8Q9NY64 477 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CLEC1BQ9P126 229 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CLCF1Q9UBD9 225 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SPTBP11277 2137 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 H0YL77 283 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CT45A8P0DMV1 189 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CT45A9P0DMV2 189 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 SLC25A6P12236 298 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 KIR2DL1P43626 348 aaPredicted RBP9.92□□□□□ -0.82
TCOF1-211ENST00000513346 AMTP48728 403 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CLDN15P56746 228 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 PPP1CAP62136 330 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 PAX5Q02548 391 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CT45A2Q5DJT8 189 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 CBLN3Q6UW01 205 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 NAT8BQ9UHF3 227 aa9.92□□□□□ -0.82
TCOF1-211ENST00000513346 A0A1B0GTQ1 180 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 HS3ST1O14792 307 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 DANCRP0C864 163 aa9.91□□□□□ -0.82
TCOF1-211ENST00000513346 KLK2P20151 261 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms