RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 GABRA6Q16445 453 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 SGCAQ16586 387 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 DUSP7Q16829 419 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 TP53I3Q53FA7 332 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 HIKESHIQ53FT3 197 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 TIMM23BQ5SRD1 257 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 SPATA46Q5T0L3 261 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 NANOGP8Q6NSW7 305 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 ACOT7LQ6ZUV0 252 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 RBM45Q8IUH3 476 aaKnown RBP3.03□□□□□ -1.92
HTT-210ENST00000512909 ERI1Q8IV48 349 aaKnown RBP3.03□□□□□ -1.92
HTT-210ENST00000512909 SLC30A8Q8IWU4 369 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 GABRG1Q8N1C3 465 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 FTMTQ8N4E7 242 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 WFDC11Q8NEX6 87 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 MFSD8Q8NHS3 518 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 LINC01006Q8NI28 216 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 C10orf82Q8WW14 230 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 LZICQ8WZA0 190 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 DCUN1D4Q92564 292 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 LRRC58Q96CX6 371 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 PGLYRP4Q96LB8 373 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 OXGR1Q96P68 337 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 SIKE1Q9BRV8 207 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 NSRP1Q9H0G5 558 aaKnown RBP3.03□□□□□ -1.92
HTT-210ENST00000512909 MAGT1Q9H0U3 335 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 RERGLQ9H628 205 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 NANOGQ9H9S0 305 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 EFCAB1Q9HAE3 211 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 BCL2L10Q9HD36 194 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 FAIMQ9NVQ4 179 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 SLC25A37Q9NYZ2 338 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 ONECUT1Q9UBC0 465 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 TMCC3Q9ULS5 477 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 RASD1Q9Y272 281 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 FAM32AQ9Y421 112 aaKnown RBP3.03□□□□□ -1.92
HTT-210ENST00000512909 N6AMT1Q9Y5N5 214 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 CELSR3Q9NYQ7 3312 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 NINQ8N4C6 2090 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 LAMA5O15230 3695 aa3.03□□□□□ -1.92
HTT-210ENST00000512909 WDFY3Q8IZQ1 3526 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 UBR5O95071 2799 aaPredicted RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 EML6Q6ZMW3 1958 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 IGHV1OR15-1A0A075B7D0 117 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 A0A1B0GWB2 263 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 A0A1W2PRG6 482 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 TRAPPC13A5PLN9 417 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 GMNCA6NCL1 334 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ZNF716A6NP11 495 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 LRRN3E7EW58 273 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 H0Y9J4 135 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 FAAHO00519 579 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ERCC1P07992 297 aaPredicted RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 NCK1P16333 377 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 TCN1P20061 433 aaPredicted RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 RPS4Y1P22090 263 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 CCNOP22674 350 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 PAX7P23759 505 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 HTR1FP30939 366 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 CD80P33681 288 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 IDH3GP51553 393 aaPredicted RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 HNRNPA3P51991 378 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 BIDP55957 195 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 WNT4P56705 351 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 GNGT1P63211 74 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 LIPEQ05469 1076 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 CLEC12BQ2HXU8 276 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 CEACAM16Q2WEN9 425 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 TRMT5Q32P41 509 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 C9orf129Q5T035 196 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 ERICH5Q6P6B1 374 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 DHRS4L2Q6PKH6 230 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 C5orf46Q6UWT4 87 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 SPNS3Q6ZMD2 512 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 MSRB3Q8IXL7 192 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 MICU2Q8IYU8 434 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 C10orf111Q8N326 155 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 LRRC18Q8N456 261 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ZIC4Q8N9L1 334 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ACBD4Q8NC06 268 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ZNF540Q8NDQ6 660 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 OR4D5Q8NGN0 318 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 OR1F12Q8NHA8 337 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 RASSF5Q8WWW0 418 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 RCN3Q96D15 328 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 SGTBQ96EQ0 304 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 SLC41A3Q96GZ6 507 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 HIST1H4GQ99525 98 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 NIPSNAP3BQ9BS92 247 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ULBP2Q9BZM5 246 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 OR51B6Q9H340 312 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 TMEM38AQ9H6F2 299 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 CRLF2Q9HC73 371 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 SAR1AQ9NR31 198 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 MED29Q9NX70 200 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 IL36GQ9NZH8 169 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 PRPF19Q9UMS4 504 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 AK6Q9Y3D8 172 aaKnown RBP3.02□□□□□ -1.93
HTT-210ENST00000512909 V9GYQ6 96 aa3.02□□□□□ -1.93
HTT-210ENST00000512909 ZGRF1Q86YA3 2104 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms