RNA–Protein interactions for RNA: ENST00000512681.5

SPOCK3-222, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, human

TSL 2 BASIC

Gene SPOCK3, Length 1,457 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOCK3-222	ENST00000512681	CBX3	Q13185	183 aa		18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	SCGB2B2	Q4G0G5	96 aa		18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ATAD3C	Q5T2N8	411 aa		18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	TMEM17	Q86X19	198 aa		18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	GTF3A	Q92664	365 aa	Known RBP	18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	PLEKHF2	Q9H8W4	249 aa		18.8	■□□□□ 0.6
SPOCK3-222	ENST00000512681	TMEM82	A0PJX8	343 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	PTBP3	O95758	552 aa	Known RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	RLN1	P04808	185 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CSN2	P05814	226 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	OR4A8	P0C604	315 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ANXA7	P20073	488 aa	Known RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	APOBEC3A	P31941	199 aa	Predicted RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	OR3A3	P47888	321 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	SELENOV	P59797	346 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	IKZF1	Q13422	519 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	SRSF7	Q16629	238 aa	Known RBP eCLIP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CHRFAM7A	Q494W8	412 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	TCTE3	Q8IZS6	198 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	BATF2	Q8N1L9	274 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	MRPL24	Q96A35	216 aa	Known RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ZNF488	Q96MN9	340 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	HDHD3	Q9BSH5	251 aa	Predicted RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	HES4	Q9HCC6	221 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ING3	Q9NXR8	418 aa		18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ZNF230	Q9UIE0	474 aa	Predicted RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	RAI1	Q7Z5J4	1906 aa	Predicted RBP	18.79	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CEACAM18	A8MTB9	384 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	VSTM5	A8MXK1	200 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681		F5H5P2	479 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CDIPT	O14735	213 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CREBL2	O60519	120 aa	Predicted RBP	18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	GRP	P07492	148 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	CDK10	Q15131	360 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	GRK1	Q15835	563 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	SPIN3	Q5JUX0	258 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ZNF626	Q68DY1	528 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681		Q6ZS49	121 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	OVCH2	Q7RTZ1	564 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	DACT3	Q96B18	629 aa	Predicted RBP	18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	BEX2	Q9BXY8	128 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	PPA2	Q9H2U2	334 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	BEX1	Q9HBH7	125 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	MSL2	Q9HCI7	577 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	IL36RN	Q9UBH0	155 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ANXA10	Q9UJ72	324 aa		18.78	■□□□□ 0.6
SPOCK3-222	ENST00000512681	UBE2QL1	A1L167	161 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	MCRIP1	C9JLW8	97 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	HPX	P02790	462 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	VSIG10L2	P0DP72	767 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	SERPINF1	P36955	418 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	EIF2B2	P49770	351 aa	Known RBP	18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	MAB21L1	Q13394	359 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ATPAF1	Q5TC12	328 aa	Predicted RBP	18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	FIP1L1	Q6UN15	594 aa	Known RBP	18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	LHFPL1	Q86WI0	220 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	C11orf53	Q8IXP5	236 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	TERB2	Q8NHR7	220 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	MRPL37	Q9BZE1	423 aa	Known RBP	18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	RIMS4	Q9H426	269 aa	Predicted RBP	18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	ZNF286A	Q9HBT8	521 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	DUSP13	Q9UII6	198 aa		18.77	■□□□□ 0.6
SPOCK3-222	ENST00000512681	POM121C	A8CG34	1229 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SULT1A3	P0DMM9	295 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SULT1A4	P0DMN0	295 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	RBM39	Q14498	530 aa	Known RBP	18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	ZNF146	Q15072	292 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	PDCD1	Q15116	288 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	FCN2	Q15485	313 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	EFNB3	Q15768	340 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	LRP11	Q86VZ4	500 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	MRGPRF	Q96AM1	343 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SEC22C	Q9BRL7	303 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	UBTD1	Q9HAC8	227 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	EHF	Q9NZC4	300 aa		18.77	■□□□□ 0.59
SPOCK3-222	ENST00000512681	PLSCR5	A0PG75	271 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	OR2AT4	A6NND4	320 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SSNA1	O43805	119 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	NXPH2	O95156	264 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	NAPSA	O96009	420 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	DANCR	P0C864	163 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	ARPC4	P59998	168 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	TSPAN5	P62079	268 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	MST1L	Q2TV78	715 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SHE	Q5VZ18	495 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681		Q6P435	159 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	MUC15	Q8N387	334 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	MAFIP	Q8WZ33	124 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SCGB3A2	Q96PL1	93 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	SYT3	Q9BQG1	590 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	RANGRF	Q9HD47	186 aa	Predicted RBP	18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	VSIG4	Q9Y279	399 aa		18.76	■□□□□ 0.59
SPOCK3-222	ENST00000512681	IGKV1D-8	A0A087WSZ0	117 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	TRBV6-6	A0A0A6YYG2	114 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	ZSCAN5B	A6NJL1	495 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	ECI1	P42126	302 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	CD83	Q01151	205 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	FAHD2B	Q6P2I3	314 aa	Predicted RBP	18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	BRICD5	Q6PL45	260 aa		18.75	■□□□□ 0.59
SPOCK3-222	ENST00000512681	WDR82	Q6UXN9	313 aa		18.75	■□□□□ 0.59

Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms