RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 PCNX2A6NKB5 2137 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ACACBO00763 2458 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 RP1P56715 2156 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ITPR1Q14643 2758 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 IGLV3-16A0A075B6K0 115 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 M0R143 59 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 AIPO00170 330 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ATG12O94817 140 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FGF2P09038 288 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 RFPL3SP0C7P2 107 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 GAS1P54826 345 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PSG4Q00888 419 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR2F1Q13607 317 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPR18Q14330 331 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 CD300EQ496F6 205 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 DNLZQ5SXM8 178 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 HIST2H3PS2Q5TEC6 136 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF549Q6P9A3 640 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 C8orf86Q6ZUL3 223 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 CBLL1Q75N03 491 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 C5orf24Q7Z6I8 188 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM151AQ8N4L1 468 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRR26Q8N8Z3 221 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LINC01356Q8N9X3 169 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4C13Q8NGP0 309 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR5AR1Q8NGP9 310 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR5K2Q8NHB8 316 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 EEF1AKMT1Q8WVE0 214 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 TMEM19Q96HH6 336 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FCRL1Q96LA6 429 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF354BQ96LW1 612 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 RCHY1Q96PM5 261 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRR25Q96S07 402 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPR21Q99679 349 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FNDC4Q9H6D8 234 aaPredicted RBP4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 HEXA-AS1Q9H8Q6 139 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 RNF121Q9H920 327 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 LRTM1Q9HBL6 345 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 SLC7A10Q9NS82 523 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 SIGLEC9Q9Y336 463 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 BOD1L1Q8NFC6 3051 aa4.3□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM95CA0A1B0GW59 222 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ANKRD20A5PA0PJZ0 165 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAP1LC3B2A6NCE7 125 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SERINC4A6NH21 518 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAM159BA6NKW6 160 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SRRM4A7MD48 611 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SOCS2O14508 198 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MLNRO43193 412 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PRAMEF10O60809 474 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 NUDT3O95989 172 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GATA1P15976 413 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 APOBEC1P41238 236 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PPP1CAP62136 330 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PPP3R1P63098 170 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 EDDM3AQ14507 147 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR1C1Q15619 314 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 HLA-DRB5Q30154 266 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CEACAM21Q3KPI0 293 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CCSMST1Q4G0I0 132 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OCIAD2Q56VL3 154 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 HES3Q5TGS1 186 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 HAGHLQ6PII5 290 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ANKRD37Q7Z713 158 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 B3GNT8Q7Z7M8 397 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 P2RY8Q86VZ1 359 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GPR32P1Q8NGA4 272 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR4E2Q8NGC2 313 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OR1S2Q8NGQ3 325 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 TERB2Q8NHR7 220 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF431Q8TF32 576 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 TCTEX1D2Q8WW35 142 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 XAGE5Q8WWM1 108 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CYGBQ8WWM9 190 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 RNF183Q96D59 192 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MRAP2Q96G30 205 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF300Q96RE9 604 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MDFIQ99750 246 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZNF436Q9C0F3 470 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MAP1LC3BQ9GZQ8 125 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 RALYQ9UKM9 306 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 FBXO7Q9Y3I1 522 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 LRP4O75096 1905 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 PLXNB3Q9ULL4 1909 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MEIKINA0A087WXM9 373 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 MED19A0JLT2 244 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 OVOL3O00110 214 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 FAAHO00519 579 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 P2RX6O15547 441 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CDC40O60508 579 aaKnown RBP eCLIP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 GCGP01275 180 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 IFNA17P01571 189 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SP1P08047 785 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 ZGLP1P0C6A0 271 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 SDC1P18827 310 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 TBPP20226 339 aa4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 CSRP1P21291 193 aaKnown RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 HIST1H1TP22492 207 aaPredicted RBP4.29□□□□□ -1.72
TRAPPC11-208ENST00000511955 RFX2P48378 723 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 165.4 ms