RNA–Protein interactions for RNA: ENST00000511332.1

COL6A6-203, Transcript of collagen type VI alpha 6 chain, humanhuman

TSL 5

Gene COL6A6, Length 778 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-203ENST00000511332 FAM90A13PP0C7W8 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A14PP0C7W9 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM90A24PP0C7X0 464 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 FAM157CP0CG43 387 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 KCNJ3P48549 501 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 BLMHQ13867 455 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 EDDM3AQ14507 147 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 PAN3Q58A45 887 aaKnown RBP10.61□□□□□ -0.71
COL6A6-203ENST00000511332 Q6P435 159 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 GDPGP1Q6ZNW5 385 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 TPRA1Q86W33 373 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 KCNG3Q8TAE7 436 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 UPRTQ96BW1 309 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 WDFY2Q96P53 400 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 GFI1Q99684 422 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 TMEM59Q9BXS4 323 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 OR51E2Q9H255 320 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 PPA2Q9H2U2 334 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 SPACA1Q9HBV2 294 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 C19orf12Q9NSK7 152 aa10.61□□□□□ -0.71
COL6A6-203ENST00000511332 A0A0G2JK05 382 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PP11 408 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 hCG_1809904A0A1W2PP81 198 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PPE2 198 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PR64 198 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 A0A1W2PRV1 198 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 hADV38S2A0JD32 116 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 GEMIN2O14893 280 aaKnown RBP10.6□□□□□ -0.71
COL6A6-203ENST00000511332 AVPP01185 164 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 FSHBP01225 129 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 ARSBP15848 533 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 CFPP27918 469 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 ERP29P30040 261 aaKnown RBP10.6□□□□□ -0.71
COL6A6-203ENST00000511332 MEF2CQ06413 473 aaPredicted RBP10.6□□□□□ -0.71
COL6A6-203ENST00000511332 PDCD1Q15116 288 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 C1orf229Q6ZS94 237 aaPredicted RBP10.6□□□□□ -0.71
COL6A6-203ENST00000511332 OR2W3Q7Z3T1 314 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 OR4S1Q8NGB4 309 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 OR4M1Q8NGD0 313 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 FAM46BQ96A09 425 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 YIPF6Q96EC8 236 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 POM121Q96HA1 1249 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 Q96M66 194 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 PCGF1Q9BSM1 259 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 SELENOIQ9C0D9 397 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 SIRPDQ9H106 197 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 BANF2Q9H503 90 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 STEAP1Q9UHE8 339 aa10.6□□□□□ -0.71
COL6A6-203ENST00000511332 NAV3Q8IVL0 2385 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 TRAV24A0A0B4J272 114 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 TRAV40A0A0B4J280 105 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 SHISA3A0PJX4 238 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 IFITM5A6NNB3 132 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 AIPO00170 330 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 HSPB6O14558 160 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 AIREO43918 545 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 MPIG6BO95866 241 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 VSIG8P0DPA2 414 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 MMP9P14780 707 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 P2RX3P56373 397 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 RIPPLY3P57055 190 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 ARF6P62330 175 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 PAX5Q02548 391 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 ATXN7L3Q14CW9 347 aaPredicted RBP10.59□□□□□ -0.71
COL6A6-203ENST00000511332 P2RY14Q15391 338 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 GPR157Q5UAW9 335 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 C1orf122Q6ZSJ8 110 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 VMO1Q7Z5L0 202 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 TMEM104Q8NE00 496 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 OR13F1Q8NGS4 319 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 SLC25A28Q96A46 364 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 DPCDQ9BVM2 203 aaPredicted RBP10.59□□□□□ -0.71
COL6A6-203ENST00000511332 METTL8Q9H825 291 aaKnown RBP10.59□□□□□ -0.71
COL6A6-203ENST00000511332 LINC00312Q9Y6C7 94 aa10.59□□□□□ -0.71
COL6A6-203ENST00000511332 NOTOA8MTQ0 251 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TMEM14DPA8MWL7 114 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 RBP4P02753 201 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 EPHA1P21709 976 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 OR10A3P58181 314 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 RPS27AP62979 156 aaKnown RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 GUCA2AQ02747 115 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 UNC119Q13432 240 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 RBM39Q14498 530 aaKnown RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 ZNF273Q14593 569 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TAF9Q16594 264 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 KRBOX4Q5JUW0 171 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 ATAD3CQ5T2N8 411 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 HES5Q5TA89 166 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 NCR3LG1Q68D85 454 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TMEM200BQ69YZ2 307 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 METAP1DQ6UB28 335 aaPredicted RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TRAPPC6BQ86SZ2 158 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 SUMF2Q8NBJ7 301 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 NEK7Q8TDX7 302 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 FAM3DQ96BQ1 224 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 TBX15Q96SF7 602 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 URM1Q9BTM9 101 aaKnown RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 CENPOQ9BU64 300 aa10.58□□□□□ -0.72
COL6A6-203ENST00000511332 RCC2Q9P258 522 aaKnown RBP10.58□□□□□ -0.72
COL6A6-203ENST00000511332 FBLN5Q9UBX5 448 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms