RNA–Protein interactions for RNA: ENST00000510533.5

NEK1-206, Transcript of NIMA related kinase 1, humanhuman

TSL 1 (best) BASIC

Gene NEK1, Length 5,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-206ENST00000510533 C7orf77A4D0Y5 90 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 M0R2Z0 102 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 GEMIN2O14893 280 aaKnown RBP9.34□□□□□ -0.91
NEK1-206ENST00000510533 NXPH1P58417 271 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 SKP2Q13309 424 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 RHBDD2Q6NTF9 364 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 PDPNQ86YL7 162 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 OR6S1Q8NH40 331 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 MRPL24Q96A35 216 aaKnown RBP9.34□□□□□ -0.91
NEK1-206ENST00000510533 SLC26A1Q9H2B4 701 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 DCAF16Q9NXF7 216 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 VAX2Q9UIW0 290 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 AMMECR1Q9Y4X0 333 aaPredicted RBP9.34□□□□□ -0.91
NEK1-206ENST00000510533 LYZP61626 148 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 DLK1P80370 383 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 GAMTQ14353 236 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 GAPTQ8N292 157 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 KNL1Q8NG31 2342 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 PPYP01298 95 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 BCL3P20749 454 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 MRPS11P82912 194 aaKnown RBP9.34□□□□□ -0.91
NEK1-206ENST00000510533 ZNF79Q15937 498 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 DHRS11Q6UWP2 260 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 TMEM108Q6UXF1 575 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 Q6ZN92 141 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 LRP11Q86VZ4 500 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 VSTM2AQ8TAG5 236 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 DTD1Q8TEA8 209 aa9.34□□□□□ -0.91
NEK1-206ENST00000510533 PACRGQ96M98 296 aaPredicted RBP9.34□□□□□ -0.91
NEK1-206ENST00000510533 IGHV1OR15-9A0A0B4J2B8 117 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 OOEPA6NGQ2 149 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 NPIPB8E9PQR5 432 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 ZNF253O75346 499 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 COX7A1P24310 79 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 LSM11P83369 360 aaKnown RBP eCLIP9.33□□□□□ -0.925e-8■■■■■ 34.7
NEK1-206ENST00000510533 ELOBQ15370 118 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 OR10A7Q8NGE5 316 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 GRAMD2BQ96HH9 432 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 GABRG3Q99928 467 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 OR2M5A3KFT3 312 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 K7ESF4 209 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 IGHV3-13P01766 116 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 IGHV3-7P01780 117 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 SULT1A1P50225 295 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 FOXO1Q12778 655 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 MPV17LQ2QL34 196 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 HLA-DRB5Q30154 266 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 OR1B1Q8NGR6 318 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 ASB5Q8WWX0 329 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 TMEM191AQ9H0A3 160 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 TRAV8-7A0A075B6U6 113 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 A0A087X0M5 115 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 A0A1B0GX30 115 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 SMIM6P0DI80 62 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 EPHA8P29322 1005 aaPredicted RBP9.33□□□□□ -0.92
NEK1-206ENST00000510533 EWSR1Q01844 656 aaKnown RBP eCLIP9.33□□□□□ -0.92
NEK1-206ENST00000510533 TMEM91Q6ZNR0 172 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 SRD5A3Q9H8P0 318 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 SIRT7Q9NRC8 400 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 OR2T8A6NH00 312 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 KLK10O43240 276 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 ACTL6AO96019 429 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 CLPPQ16740 277 aaPredicted RBP9.33□□□□□ -0.92
NEK1-206ENST00000510533 DHRS13Q6UX07 377 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 RASL10BQ96S79 203 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 ANGPTL4Q9BY76 406 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 RAB33BQ9H082 229 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 CCL28Q9NRJ3 127 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 SLC2A9Q9NRM0 540 aa9.33□□□□□ -0.92
NEK1-206ENST00000510533 PPIHO43447 177 aaKnown RBP9.32□□□□□ -0.92
NEK1-206ENST00000510533 CIDEAO60543 219 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 ANKRD55Q3KP44 614 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 LYRM7Q5U5X0 104 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 C10orf111Q8N326 155 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 SNX22Q96L94 193 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 NRTNQ99748 197 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 PARP11Q9NR21 331 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 NAGKQ9UJ70 344 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 MS4A18H0YCH9 400 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 CEACAM3P40198 252 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 PMELP40967 661 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 TCL1AP56279 114 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 TNXAQ16473 311 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 MS4A18Q3C1V0 323 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 ADAD2Q8NCV1 583 aaKnown RBP9.32□□□□□ -0.92
NEK1-206ENST00000510533 CLEC5AQ9NY25 188 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 WNT16Q9UBV4 365 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 ZNF716A6NP11 495 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 MFNGO00587 321 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 CYR61O00622 381 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 CDS2O95674 445 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 PSG5Q15238 335 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 TMEM211Q6ICI0 200 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 HAND1O96004 215 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 HIST3H3Q16695 136 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 FAM74A3Q4VXF1 159 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 OR4P4Q8NGL7 312 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 ABHD14AQ9BUJ0 271 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 WASHC3Q9Y3C0 194 aa9.32□□□□□ -0.92
NEK1-206ENST00000510533 KIAA1551Q9HCM1 1747 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms