RNA–Protein interactions for RNA: ENST00000509769.5

USP53-205, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 1 (best)

Gene USP53, Length 4,803 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-205ENST00000509769 IFITM1P13164 125 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TNFSF9P41273 254 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SLC25A1P53007 311 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DHRS2Q13268 280 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SYT14P1Q58G82 188 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TMEM255AQ5JRV8 349 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ABHD17BQ5VST6 288 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 WDR25Q64LD2 544 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 ANKRD33Q7Z3H0 272 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 BIVMQ86UB2 503 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 C1orf127Q8N9H9 656 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NFAM1Q8NET5 270 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 MDGA1Q8NFP4 955 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR13H1Q8NG92 308 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR10V1Q8NGI7 309 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR4D5Q8NGN0 318 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ISOC2Q96AB3 205 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 WDYHV1Q96HA8 205 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NPY6RQ99463 290 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DUSP23Q9BVJ7 150 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 BCO2Q9BYV7 579 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 S1PR5Q9H228 398 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TXNIPQ9H3M7 391 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ZNF665Q9H7R5 613 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SERGEFQ9UGK8 458 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NEU3Q9UQ49 428 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NTNG1Q9Y2I2 539 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 KIF20BQ96Q89 1820 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 A0A1B0GWA3 101 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 C5orf49A4QMS7 147 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 YJEFN3A6XGL0 299 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 HS3ST1O14792 307 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 GJB5O95377 273 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TMEM50AO95807 157 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 HMGN2P05204 90 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 OR4A8P0C604 315 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 FCGR2AP12318 317 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ZNF250P15622 560 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ATP6V0CP27449 155 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 AVPR2P30518 371 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 APOBEC3AP31941 199 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 CXCL12P48061 93 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ERVK11-1P61568 191 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 RPS26P62854 115 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 HYAL1Q12794 435 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SPP2Q13103 211 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TMEM30BQ3MIR4 351 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OTPQ5XKR4 325 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 C12orf73Q69YU5 71 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CLEC2AQ6UVW9 174 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 GLIPR1L1Q6UWM5 242 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SH2D5Q6ZV89 423 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 FAM57BQ71RH2 274 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ISCA2Q86U28 154 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DRAM1Q8N682 238 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 TP53I13Q8NBR0 393 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 ABHD3Q8WU67 409 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ASB10Q8WXI3 467 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SPACA9Q96E40 222 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 MS4A4AQ96JQ5 239 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 KLHDC3Q9BQ90 382 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 G6PC2Q9NQR9 355 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 APOBEC3BQ9UH17 382 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 CES1P1Q9UKY3 287 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CFAP20Q9Y6A4 193 aaKnown RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 R4GMQ9 66 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SNED1Q8TER0 1413 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LRRC37A2A6NM11 1700 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ALOX5APP20292 161 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ATP5EP56381 51 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 PSG5Q15238 335 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR1Q1Q15612 314 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 PSG3Q16557 428 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ISXQ2M1V0 245 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OCIAD2Q56VL3 154 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 GAGE2AQ6NT46 116 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 NHLRC1Q6VVB1 395 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DEFB128Q7Z7B8 93 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CLEC14AQ86T13 490 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LDLRAD3Q86YD5 345 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 PDPNQ86YL7 162 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 LINC00346Q8IVM7 164 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ANKRD29Q8N6D5 301 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DCBLD1Q8N8Z6 715 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OR52B4Q8NGK2 314 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 OLIG1Q8TAK6 271 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 RNF138Q8WVD3 245 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 DLX4Q92988 240 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 PELI1Q96FA3 418 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SDHCQ99643 169 aaPredicted RBP3.18□□□□□ -1.9
USP53-205ENST00000509769 C20orf144Q9BQM9 153 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 C1QTNF6Q9BXI9 259 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 VN1R1Q9GZP7 353 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 ZFP64Q9NPA5 681 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 PDLIM7Q9NR12 457 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 HES2Q9Y543 173 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 FAM157AC9JC47 383 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 PYCARD-AS1I3L0S3 204 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 CDC42EP2O14613 210 aa3.18□□□□□ -1.9
USP53-205ENST00000509769 SH2D1BO14796 132 aa3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms