RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TK1P04183 234 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 CELA3AP09093 270 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF883P0CG24 379 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 CCL2P13500 99 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 DAZAP2Q15038 168 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF565Q8N9K5 539 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 LYPD6BQ8NI32 183 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 KIRREL1Q96J84 757 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 GINS3Q9BRX5 216 aa15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 COLQQ9Y215 455 aaPredicted RBP15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 RCL1Q9Y2P8 373 aaKnown RBP15.43■□□□□ 0.06
CCHCR1-228ENST00000509552 OR8U9P0C7N5 309 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 ID4P47928 161 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 DBX2Q6ZNG2 339 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 MKXQ8IYA7 352 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 OR8U1Q8NH10 309 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 BSCL2Q96G97 398 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 HIST1H2AAQ96QV6 131 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 SPRY4Q9C004 299 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 LUZP4Q9P127 313 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 UBE2J1Q9Y385 318 aaPredicted RBP15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 PCSK5Q92824 1860 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 FAM166BA8MTA8 275 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 C9orf172C9J069 976 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 TRAPPC2LH3BP13 241 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 CDS2O95674 445 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 SPIN3Q5JUX0 258 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 COMMD1Q8N668 190 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 OR4D5Q8NGN0 318 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 APH1AQ96BI3 265 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 TMEM222Q9H0R3 208 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 WFDC1Q9HC57 220 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 Q9N2K0 584 aa15.42■□□□□ 0.06
CCHCR1-228ENST00000509552 DOCK10Q96BY6 2186 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 DMDP11532 3685 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF732B4DXR9 585 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 DANCRP0C864 163 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 ARR3P36575 388 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 MAGEA5P43359 124 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 OR1C1Q15619 314 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 MPV17LQ2QL34 196 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF695Q8IW36 515 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 NEK7Q8TDX7 302 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 HPSE2Q8WWQ2 592 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 GUCD1Q96NT3 240 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 GPR87Q9BY21 358 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 HES7Q9BYE0 225 aa15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 PARP12Q9H0J9 701 aaKnown RBP15.41■□□□□ 0.06
CCHCR1-228ENST00000509552 COL27A1Q8IZC6 1860 aaPredicted RBP15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 TRDCB7Z8K6 153 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 HEXAP06865 529 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SPP1P10451 314 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 ITGA3P26006 1051 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 GNRHRP30968 328 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 CAMLGP49069 296 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 RAB5CP51148 216 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF616Q08AN1 781 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 TMEM164Q5U3C3 297 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SECTM1Q8WVN6 248 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SPIN2AQ99865 258 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SPIN2BQ9BPZ2 258 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 TTTY12Q9BZ98 90 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 ZDHHC8Q9ULC8 765 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 KIR2DS1A0A191URI9 304 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 ZNF724A8MTY0 619 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 NAPSAO96009 420 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 KIR2DS4P43632 304 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 RAB1AP62820 205 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 PLGLB1Q02325 96 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 PLP2Q04941 152 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 KIR2DS1Q14954 304 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 HMGN3Q15651 99 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 MIDNQ504T8 468 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 CDCP2Q5VXM1 449 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 TBC1D26Q86UD7 250 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 DMBX1Q8NFW5 382 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SAV1Q9H4B6 383 aaPredicted RBP15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 OPA3Q9H6K4 179 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 KPTNQ9Y664 436 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 SHANK1Q9Y566 2161 aa15.4■□□□□ 0.06
CCHCR1-228ENST00000509552 C21orf140B9A014 251 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NFYBP25208 207 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 FOXG1P55316 489 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 RND3P61587 244 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NHLH2Q02577 135 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 OR5A2Q8NGI9 324 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 FGF23Q9GZV9 251 aaPredicted RBP15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 RNF122Q9H9V4 155 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 FOXJ2Q9P0K8 574 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 STRAPQ9Y3F4 350 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 ZNHIT1O43257 154 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NDUFA2O43678 99 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NME2P1O60361 137 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 PRH1P02810 166 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 CTXN2P0C2S0 81 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 SNCAP37840 140 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 MPLP40238 635 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 NOVA1P51513 510 aaKnown RBP15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 PEA15Q15121 130 aa15.39■□□□□ 0.05
CCHCR1-228ENST00000509552 MCEMP1Q8IX19 187 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms