RNA–Protein interactions for RNA: ENST00000509389.5

HMGCL-208, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 1 (best)

Gene HMGCL, Length 1,379 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-208ENST00000509389 CTDSPLO15194 276 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 CA6P23280 308 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 MPZP25189 248 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 FGF12P61328 243 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 IFITM3Q01628 133 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 OR8G1Q15617 311 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 DEFB112Q30KQ8 113 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 AWAT2Q6E213 333 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 C16orf87Q6PH81 154 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 ANGPTL5Q86XS5 388 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 SAXO1Q8IYX7 474 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 PNLDC1Q8NA58 520 aaKnown RBP12.08□□□□□ -0.48
HMGCL-208ENST00000509389 NPRL2Q8WTW4 380 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 SLC22A4Q9H015 551 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 PRDM13Q9H4Q3 707 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 SLC7A11Q9UPY5 501 aa12.08□□□□□ -0.48
HMGCL-208ENST00000509389 FOXI3A8MTJ6 420 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-208ENST00000509389 HOXA3O43365 443 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-208ENST00000509389 UPK1BO75841 260 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 PTBP3O95758 552 aaKnown RBP12.07□□□□□ -0.48
HMGCL-208ENST00000509389 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
HMGCL-208ENST00000509389 TALDO1P37837 337 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 MTCP1P56278 107 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 PYHIN1Q6K0P9 492 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 GLIPR1L1Q6UWM5 242 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 FAM131AQ6UXB0 335 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 MOB3CQ70IA8 216 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 TM2D1Q9BX74 207 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 FN3KRPQ9HA64 309 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 RNF7Q9UBF6 113 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 CTSZQ9UBR2 303 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 RAB22AQ9UL26 194 aa12.07□□□□□ -0.48
HMGCL-208ENST00000509389 IGKV1-12A0A0C4DH73 117 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 FAM25AB3EWG3 89 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 FAM25CB3EWG5 89 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 FAM25GB3EWG6 89 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 LGALS8O00214 317 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 XRCC3O43542 346 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 ENSAO43768 121 aaKnown RBP12.06□□□□□ -0.48
HMGCL-208ENST00000509389 IGKV1D-12P01611 117 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 OMGP23515 440 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 NPY4RP50391 375 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 ATP1B3P54709 279 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 GNG3P63215 75 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 PDZK1IP1Q13113 114 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 DMRTC1Q5HYR2 192 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 GPR157Q5UAW9 335 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 SFRP4Q6FHJ7 346 aaPredicted RBP12.06□□□□□ -0.48
HMGCL-208ENST00000509389 WDR86Q86TI4 376 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 CALHM1Q8IU99 346 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 FAM89BQ8N5H3 189 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 BOLLQ8N9W6 283 aaKnown RBP12.06□□□□□ -0.48
HMGCL-208ENST00000509389 KCNG3Q8TAE7 436 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 TNFAIP8L1Q8WVP5 186 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 TRIM63Q969Q1 353 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 ZDHHC16Q969W1 377 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 ADAT1Q9BUB4 502 aaKnown RBP12.06□□□□□ -0.48
HMGCL-208ENST00000509389 PKIBQ9C010 78 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 LPAR5Q9H1C0 372 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 TLNRD1Q9H1K6 362 aa12.06□□□□□ -0.48
HMGCL-208ENST00000509389 TMEM210A6NLX4 147 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 SRRM5B3KS81 715 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RAB27BO00194 218 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TNFRSF13BO14836 293 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 GSTZ1O43708 216 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 SCGNO76038 276 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 OCMP0CE72 109 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 CDK2P24941 298 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 BPIFB3P59826 476 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RPS27AP62979 156 aaKnown RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 CD276Q5ZPR3 534 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RUSC1-AS1Q66K80 236 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 ELP2Q6IA86 826 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 OR10K2Q6IF99 312 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RFT1Q96AA3 541 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 S100A16Q96FQ6 103 aaKnown RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 ABHD1Q96SE0 405 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 GPER1Q99527 375 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 PCGF1Q9BSM1 259 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 RTL8AQ9BWD3 113 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 CST11Q9H112 138 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 OR51I2Q9H344 312 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TNFRSF19Q9NS68 423 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 MMP24Q9Y5R2 645 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 A0A0A6YYD4 124 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 FAM230AA0A1W2PPH8 454 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 FAM181BA6NEQ2 426 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 C3orf80F5H4A9 247 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 J3QT63 122 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 ADAM20O43506 726 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 ZNF780AO75290 641 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 KDM4BO94953 1096 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 SFTPBP07988 381 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 ACAA1P09110 424 aaPredicted RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 IL7P13232 177 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 CFHR2P36980 270 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 TAS2R20P59543 309 aa12.05□□□□□ -0.48
HMGCL-208ENST00000509389 MRPS10P82664 201 aaKnown RBP12.05□□□□□ -0.48
HMGCL-208ENST00000509389 IL24Q13007 206 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms