RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 TMEM52BQ4KMG9 183 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 TTC32Q5I0X7 151 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 BCL2L15Q5TBC7 163 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 DGAT2L6Q6ZPD8 337 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 BCDIN3DQ7Z5W3 292 aaKnown RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ABHD12Q8N2K0 398 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 CTHRC1Q96CG8 243 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 MYEOVQ96EZ4 313 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 HSPB9Q9BQS6 159 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 SLC30A2Q9BRI3 323 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 DCTN5Q9BTE1 182 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 FKRPQ9H9S5 495 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 NTNG1Q9Y2I2 539 aa3.38□□□□□ -1.87
NEDD4-209ENST00000508871 ZBTB32Q9Y2Y4 487 aaPredicted RBP3.38□□□□□ -1.87
NEDD4-209ENST00000508871 DIDO1Q9BTC0 2240 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 A0A0X1KG70 313 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MKRN2OSH3BPM6 223 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF593O00488 134 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 JTBO76095 146 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 GABRA1P14867 456 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MPGP29372 298 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 XGP55808 180 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 S100A10P60903 97 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SSBP2P81877 361 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 INSM1Q01101 510 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FAM219BQ5XKK7 198 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FAM109BQ6ICB4 259 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 GRINAQ7Z429 371 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 THOC6Q86W42 341 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR1L3Q8NH93 324 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 LIN37Q96GY3 246 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 DUX3Q96PT4 197 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 S100A13Q99584 98 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SLC25A39Q9BZJ4 359 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 A0A087WZ39 114 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM189A5PLL7 270 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 IGLON5A6NGN9 336 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FAM90A26D6RGX4 464 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 UPK1BO75841 260 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 C8GP07360 202 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CTXN2P0C2S0 81 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CISD3P0C7P0 127 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CEACAM8P31997 349 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SAA4P35542 130 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PPOXP50336 477 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 DGCR2P98153 550 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FAM27E3Q08E93 113 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 MLF2Q15773 248 aaPredicted RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TAF9Q16594 264 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 UTF1Q5T230 341 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ANKRD54Q6NXT1 300 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SLC23A3Q6PIS1 610 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TBPL2Q6SJ96 375 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CA13Q8N1Q1 262 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 KRTCAP2Q8N6L1 136 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR4C13Q8NGP0 309 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR1K1Q8NGR3 316 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR9A2Q8NGT5 310 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 STAG3L4Q8TBR4 150 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PIK3IP1Q96FE7 263 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF382Q96SR6 550 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NMNAT3Q96T66 252 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TEX101Q9BY14 249 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 POMKQ9H5K3 350 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZDHHC11Q9H8X9 412 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 LAMTOR3Q9UHA4 124 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NUFIP1Q9UHK0 495 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 POLDIP2Q9Y2S7 368 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PIGBOS1A0A0B4J2F0 54 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM218A2RU14 115 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ANKRD65E5RJM6 399 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PI15O43692 258 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 STK16O75716 305 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PTH2RP49190 550 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 CRADDP78560 199 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF678Q5SXM1 525 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 RPL7L1Q6DKI1 246 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 BAP18Q8IXM2 172 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SLC26A10Q8NG04 563 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR11H7Q8NGC8 314 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 OR52E2Q8NGJ4 325 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 FAM222BQ8WU58 562 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 LINC01587Q99440 93 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 DUSP26Q9BV47 211 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 GAR1Q9NY12 217 aaKnown RBP3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM216Q9P0N5 145 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TICRRQ7Z2Z1 1910 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 KCNE1BA0A087WTH5 132 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 A0A1B0GVT2 93 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 RBFOX3A6NFN3 312 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 NPIPB8E9PQR5 432 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 INMT-MINDY4F8WBC2 141 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 H0YIZ8 118 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 PPP6CO00743 305 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 TNFSF11O14788 317 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 DANCRP0C864 163 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SMIM6P0DI80 62 aa3.37□□□□□ -1.87
NEDD4-209ENST00000508871 SCGB1A1P11684 91 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms