RNA–Protein interactions for RNA: ENST00000508573.1

SMARCA5-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 5, humanhuman

TSL 2

Gene SMARCA5, Length 363 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5-202ENST00000508573 KIAA1644Q3SXP7 199 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 HENMT1Q5T8I9 393 aaKnown RBP3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 TSPO2Q5TGU0 170 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 RSBN1Q5VWQ0 802 aaPredicted RBP3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 Q6ZRP5 223 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 ANGPTL5Q86XS5 388 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 CDC20BQ86Y33 519 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM71E2Q8N5Q1 922 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 GPR26Q8NDV2 337 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 OR52L1Q8NGH7 329 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 OR9I1Q8NGQ6 314 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 OR1S1Q8NH92 325 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 MCFD2Q8NI22 146 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 LRRC29Q8WV35 223 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 SKA2Q8WVK7 121 aaPredicted RBP3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 SMARCD1Q96GM5 515 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 FMC1Q96HJ9 113 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 FOPNLQ96NB1 174 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 DMAC2Q9NW81 257 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 HEY1Q9Y5J3 304 aa3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 WRNQ14191 1432 aaPredicted RBP eCLIP3.32□□□□□ -1.88
SMARCA5-202ENST00000508573 PHF3Q92576 2039 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 KIF1BO60333 1816 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ARAP1Q96P48 1450 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 PTPRKQ15262 1439 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 CD109Q6YHK3 1445 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 TRAV39A0A0B4J263 110 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM236DA0A1B0GTK5 79 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 EEF1E1-BLOC1S5C9J1V9 151 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 K7N7A8 449 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 DLEU1O43261 78 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 EEF1E1O43324 174 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF207O43670 478 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ORC5O43913 435 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 PDCD6O75340 191 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 PPP1R3DO95685 299 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 FBP1P09467 338 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 H2AFZP0C0S5 128 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 SULT1A3P0DMM9 295 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 SULT1A4P0DMN0 295 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM236CP0DP71 79 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 CD1EP15812 388 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 GPX2P18283 190 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OGNP20774 298 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 CD34P28906 385 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 AQP1P29972 269 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 CD70P32970 193 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 VDAC2P45880 294 aaPredicted RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 RPS21P63220 83 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 INCA1Q0VD86 236 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 WHAMMP3Q1A5X7 153 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 KRTAP24-1Q3LI83 254 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 TCTEX1D4Q5JR98 221 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM162BQ5T6X4 162 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 SAMD13Q5VXD3 122 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 DGAT2L6Q6ZPD8 337 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 TRPT1Q86TN4 253 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 TGIF2LYQ8IUE0 185 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZCCHC24Q8N2G6 241 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OSR2Q8N2R0 312 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 C4orf32Q8N8J7 132 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 UBAC2Q8NBM4 344 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF439Q8NDP4 499 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR51A2Q8NGJ7 313 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR51S1Q8NGJ8 323 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR1N2Q8NGR9 330 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR2K2Q8NGT1 345 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR2T4Q8NH00 348 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 OR5J2Q8NH18 312 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 RGP1Q92546 391 aaPredicted RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 DCPSQ96C86 337 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF689Q96CS4 500 aaPredicted RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 L3HYPDHQ96EM0 354 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 DCUN1D1Q96GG9 259 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 BMFQ96LC9 184 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 DNAJC30Q96LL9 226 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF354BQ96LW1 612 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 HIST1H4GQ99525 98 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 C1QTNF4Q9BXJ3 329 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 POMKQ9H5K3 350 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 MOB1AQ9H8S9 216 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF71Q9NQZ8 489 aaPredicted RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 C14orf105Q9NVL8 296 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 RBFOX1Q9NWB1 397 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 ZNF226Q9NYT6 803 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 CLCF1Q9UBD9 225 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 YTHDF2Q9Y5A9 579 aaKnown RBP3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 WSB1Q9Y6I7 421 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 SCN5AQ14524 2016 aa3.31□□□□□ -1.88
SMARCA5-202ENST00000508573 GRIN2BQ13224 1484 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 RTL9Q8NET4 1388 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 IGHV3OR16-13A0A075B7E8 117 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TRAV8-6A0A0B4J262 113 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 A0A0B4J2A0 478 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 IGHV3OR16-9A0A0B4J2B5 98 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 TEX50A0A1B0GTY4 177 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 A0A1W2PRE2 83 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 MAP1LC3B2A6NCE7 125 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 FAM183AA6NL82 134 aa3.3□□□□□ -1.88
SMARCA5-202ENST00000508573 D6RAR5 112 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms