RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FOXRED1Q96CU9 486 aaPredicted RBP16.21■□□□□ 0.19
SFXN1-209ENST00000508290 FAM192AQ9GZU8 254 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 CHST6Q9GZX3 395 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 MEGF9Q9H1U4 602 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 NCOR1P1Q9H4R4 102 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 BEX1Q9HBH7 125 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 TAS2R3Q9NYW6 316 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 FOXJ3Q9UPW0 622 aa16.21■□□□□ 0.19
SFXN1-209ENST00000508290 A0A0G2JK05 382 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 GPR137BO60478 399 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 CELP19835 753 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 SNU13P55769 128 aaKnown RBP16.2■□□□□ 0.18
SFXN1-209ENST00000508290 RPS11P62280 158 aaKnown RBP eCLIP16.2■□□□□ 0.18
SFXN1-209ENST00000508290 NHLRC3Q5JS37 347 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 TRAPPC6BQ86SZ2 158 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 LINC00596Q86U02 117 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 OR11H6Q8NGC7 330 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 CORO2AQ92828 525 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 METTL9Q9H1A3 318 aa16.2■□□□□ 0.18
SFXN1-209ENST00000508290 TRBV5-7A0A0A0MS05 114 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 A0A1W2PRD5 423 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 A0A1W2PRF3 423 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 A0A1W2PRM7 423 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 CLPXO76031 633 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 CSTBP04080 98 aaKnown RBP16.19■□□□□ 0.18
SFXN1-209ENST00000508290 RAG2P55895 527 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 DLX1P56177 255 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 PAX5Q02548 391 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 GPR50Q13585 617 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 DOC2BQ14184 412 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 Q6P435 159 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 LIAT1Q6ZQX7 453 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 RNF144BQ7Z419 303 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 PNKDQ8N490 385 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 NKAIN3Q8N8D7 197 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 DTX3Q8N9I9 347 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 SGMS2Q8NHU3 365 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 SLITRK2Q9H156 845 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 RAB18Q9NP72 206 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 TNFRSF19Q9NS68 423 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 OR6C3Q9NZP0 311 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 SESN1Q9Y6P5 492 aa16.19■□□□□ 0.18
SFXN1-209ENST00000508290 TENM1Q9UKZ4 2725 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 PTGES3LE9PB15 166 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 SLC33A1O00400 549 aaPredicted RBP16.18■□□□□ 0.18
SFXN1-209ENST00000508290 CALCBP10092 127 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 COX7A1P24310 79 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 TGFBR2P37173 567 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 SLC35A2P78381 396 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 SCN1BQ07699 218 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 SPHARQ15513 63 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 LRRC75BQ2VPJ9 315 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 ZNF626Q68DY1 528 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 ZNF782Q6ZMW2 699 aaPredicted RBP16.18■□□□□ 0.18
SFXN1-209ENST00000508290 TCF23Q7RTU1 214 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 ZFP41Q8N8Y5 198 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 MALSU1Q96EH3 234 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 MRPS24Q96EL2 167 aaKnown RBP16.18■□□□□ 0.18
SFXN1-209ENST00000508290 DERL3Q96Q80 235 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 OR14A2Q96R54 314 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 ZNF184Q99676 751 aaPredicted RBP16.18■□□□□ 0.18
SFXN1-209ENST00000508290 BARHL1Q9BZE3 327 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 PPA2Q9H2U2 334 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 IFT22Q9H7X7 185 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 C1RLQ9NZP8 487 aa16.18■□□□□ 0.18
SFXN1-209ENST00000508290 ODAMA1E959 279 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 MEGF11A6BM72 1044 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 FAM90A8PA6NJQ4 464 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 ODF3BA8MYP8 253 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 OR3A4PP47883 348 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 PRB3Q04118 309 aaPredicted RBP16.17■□□□□ 0.18
SFXN1-209ENST00000508290 TAF9Q16594 264 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 KRBOX4Q5JUW0 171 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 MINOS1Q5TGZ0 78 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 RTN4RL2Q86UN3 420 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 OSR2Q8N2R0 312 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 OR13C5Q8NGS8 318 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 DUSP21Q9H596 190 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 BLOC1S6Q9UL45 172 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 MINOS1-NBL1R4GNA1 71 aa16.17■□□□□ 0.18
SFXN1-209ENST00000508290 VGLL3A8MV65 326 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 H3BUI4 141 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 GTF2F2P13984 249 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 AESQ08117 197 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 MPV17LQ2QL34 196 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 PAN3Q58A45 887 aaKnown RBP16.16■□□□□ 0.18
SFXN1-209ENST00000508290 DHRS7BQ6IAN0 325 aaPredicted RBP16.16■□□□□ 0.18
SFXN1-209ENST00000508290 IZUMO2Q6UXV1 221 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 HEPN1Q6WQI6 88 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 TPRX1Q8N7U7 411 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 ZNF565Q8N9K5 539 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 SSX3Q99909 188 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 CLEC7AQ9BXN2 247 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 TMEM133Q9H2Q1 129 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 SPACA1Q9HBV2 294 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 ING4Q9UNL4 249 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 ST3GAL6Q9Y274 331 aa16.16■□□□□ 0.18
SFXN1-209ENST00000508290 PNMA8CA0A1B0GUJ8 204 aa16.15■□□□□ 0.18
SFXN1-209ENST00000508290 ZNF729A6NN14 1252 aaPredicted RBP16.15■□□□□ 0.18
SFXN1-209ENST00000508290 RGS10O43665 173 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms