RNA–Protein interactions for RNA: ENST00000508235.1

RNF4-210, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-210ENST00000508235 STUB1Q9UNE7 303 aa12.35□□□□□ -0.43
RNF4-210ENST00000508235 A0A0A6YYJ9 748 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 TRAV1-2A0A0B4J238 106 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 SLC33A1O00400 549 aaPredicted RBP12.34□□□□□ -0.43
RNF4-210ENST00000508235 CD37P11049 281 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 HTR2CP28335 458 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 FGF9P31371 208 aaPredicted RBP12.34□□□□□ -0.43
RNF4-210ENST00000508235 KCNJ3P48549 501 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 PIGYQ3MUY2 71 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 KLF17Q5JT82 389 aaPredicted RBP12.34□□□□□ -0.43
RNF4-210ENST00000508235 PRIMA1Q86XR5 153 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 OR6M1Q8NGM8 313 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 ZNF418Q8TF45 676 aaPredicted RBP12.34□□□□□ -0.43
RNF4-210ENST00000508235 SUCNR1Q9BXA5 334 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 PPA2Q9H2U2 334 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 PLGRKTQ9HBL7 147 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 SPACA1Q9HBV2 294 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 SSR3Q9UNL2 185 aa12.34□□□□□ -0.43
RNF4-210ENST00000508235 NAV3Q8IVL0 2385 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A10PA6NDY2 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A18PA6NE21 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A16PA6NEW6 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A20PA6NIJ5 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A8PA6NJQ4 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A7PA6NKC0 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A22PA8MWA6 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A12PA8MX19 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A5PA8MXJ8 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A23PA8MXZ1 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 SLC22A1O15245 554 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 TCF21O43680 179 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 OR7C1O76099 320 aaPredicted RBP12.33□□□□□ -0.44
RNF4-210ENST00000508235 RBP4P02753 201 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A15PP0C7V4 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A13PP0C7W8 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A14PP0C7W9 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 FAM90A24PP0C7X0 464 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 PRTN3P24158 256 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 P2RX3P56373 397 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 KRTAP21-3Q3LHN1 58 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 PAN3Q58A45 887 aaKnown RBP12.33□□□□□ -0.44
RNF4-210ENST00000508235 C9orf139Q6ZV77 190 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 LHX4Q969G2 390 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 JMJD8Q96S16 334 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 BARHL1Q9BZE3 327 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 UNKLQ9H9P5 680 aaKnown RBP12.33□□□□□ -0.44
RNF4-210ENST00000508235 UBE2J1Q9Y385 318 aaPredicted RBP12.33□□□□□ -0.44
RNF4-210ENST00000508235 LINC00312Q9Y6C7 94 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 V9GY05 133 aa12.33□□□□□ -0.44
RNF4-210ENST00000508235 C2CD3Q4AC94 2353 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 TRGV10A0A0A0MS01 117 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 IGHV1-69DA0A0B4J2H0 117 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 SLC17A2O00624 439 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 GEMIN2O14893 280 aaKnown RBP12.32□□□□□ -0.44
RNF4-210ENST00000508235 CRTAPO75718 401 aaPredicted RBP12.32□□□□□ -0.44
RNF4-210ENST00000508235 BPNT1O95861 308 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 IGHV1-69P01742 117 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 ZNF728P0DKX0 622 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 IGHV4-38-2P0DP08 117 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 MGMTP16455 207 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 ERVFRD-1P60508 538 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 ZNF273Q14593 569 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 KRBOX4Q5JUW0 171 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 C22orf42Q6IC83 251 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 RBMS3Q6XE24 437 aaKnown RBP12.32□□□□□ -0.44
RNF4-210ENST00000508235 USP43Q70EL4 1123 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 TRAPPC6BQ86SZ2 158 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 Q8N7P7 452 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 KCNG3Q8TAE7 436 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 C1orf147Q96MC9 270 aaPredicted RBP12.32□□□□□ -0.44
RNF4-210ENST00000508235 ZNF714Q96N38 554 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 NCOR1P1Q9H4R4 102 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 SIRT7Q9NRC8 400 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 ZNF69Q9UC07 566 aa12.32□□□□□ -0.44
RNF4-210ENST00000508235 AK6Q9Y3D8 172 aaKnown RBP12.32□□□□□ -0.44
RNF4-210ENST00000508235 TRAV24A0A0B4J272 114 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 CENPVL3A0A0U1RRI6 287 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 C17orf98A8MV24 154 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 HSPB6O14558 160 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 CD36P16671 472 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 PAX5Q02548 391 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 RBM39Q14498 530 aaKnown RBP12.31□□□□□ -0.44
RNF4-210ENST00000508235 RAB11BQ15907 218 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 TIMM50Q3ZCQ8 353 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 ATAD3CQ5T2N8 411 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 SUMF2Q8NBJ7 301 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 DPCDQ9BVM2 203 aaPredicted RBP12.31□□□□□ -0.44
RNF4-210ENST00000508235 SELENOIQ9C0D9 397 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 GAL3ST2Q9H3Q3 398 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 BANF2Q9H503 90 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 HEXA-AS1Q9H8Q6 139 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 TXNL4BQ9NX01 149 aaKnown RBP12.31□□□□□ -0.44
RNF4-210ENST00000508235 OR6C3Q9NZP0 311 aa12.31□□□□□ -0.44
RNF4-210ENST00000508235 IGHV3OR16-10A0A075B7F0 116 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 A0A1W2PP11 408 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 ODAMA1E959 279 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 MPIG6BO95866 241 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 VSIG8P0DPA2 414 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 ARSBP15848 533 aa12.3□□□□□ -0.44
RNF4-210ENST00000508235 CCL3L1P16619 93 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 81.9 ms