RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 DGCR14Q96DF8 476 aaKnown RBP16.68■□□□□ 0.26
USP53-203ENST00000507597 FAM157AC9JC47 383 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 H3BMQ9 156 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 SLC33A1O00400 549 aaPredicted RBP16.67■□□□□ 0.26
USP53-203ENST00000507597 PDCD6O75340 191 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 ZNF737O75373 536 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 DVL1P1P54792 670 aaPredicted RBP16.67■□□□□ 0.26
USP53-203ENST00000507597 UNC119Q13432 240 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 BTN2A1Q7KYR7 527 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 CIARTQ8N365 385 aaPredicted RBP16.67■□□□□ 0.26
USP53-203ENST00000507597 NDNFQ8TB73 568 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 RAB40AQ8WXH6 277 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 CMTM3Q96MX0 182 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 DPCDQ9BVM2 203 aaPredicted RBP16.67■□□□□ 0.26
USP53-203ENST00000507597 LPAR5Q9H1C0 372 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 BATF3Q9NR55 127 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 PEX16Q9Y5Y5 336 aa16.67■□□□□ 0.26
USP53-203ENST00000507597 A0A0G2JMP0 313 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 A0A0X1KG70 313 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 hCG_1809904A0A1W2PP81 198 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 A0A1W2PPE2 198 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 A0A1W2PR64 198 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 A0A1W2PRV1 198 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 LDLRAD4O15165 306 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 PHF1O43189 567 aaPredicted RBP16.66■□□□□ 0.26
USP53-203ENST00000507597 CA11O75493 328 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 SNRPBP14678 240 aaKnown RBP16.66■□□□□ 0.26
USP53-203ENST00000507597 BLVRBP30043 206 aaPredicted RBP16.66■□□□□ 0.26
USP53-203ENST00000507597 EDDM3BP56851 147 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 MEF2CQ06413 473 aaPredicted RBP16.66■□□□□ 0.26
USP53-203ENST00000507597 C17orf107Q6ZR85 190 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 CMTM4Q8IZR5 234 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 FAM89BQ8N5H3 189 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 SUMF2Q8NBJ7 301 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 OR4M2Q8NGB6 313 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 TMEM186Q96B77 213 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 MSI2Q96DH6 328 aaKnown RBP16.66■□□□□ 0.26
USP53-203ENST00000507597 DCTN5Q9BTE1 182 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 DIABLOQ9NR28 239 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 PLEKHJ1Q9NW61 149 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 METRNQ9UJH8 293 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 KCNS2Q9ULS6 477 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 MYO9AB2RTY4 2548 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 CREBBPQ92793 2442 aa16.66■□□□□ 0.26
USP53-203ENST00000507597 A0A0A6YYH2 397 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 A0A1W2PQ09 198 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 hADV38S2A0JD32 116 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 A6NJ64 397 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 J3QLI3 93 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 CD5LO43866 347 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 VEGFCP49767 419 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 SEC61A1P61619 476 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 RPL31P62899 125 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 MRPS15P82914 257 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 PDCD1Q15116 288 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 DCAF12L2Q5VW00 463 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 Q6ZTK2 550 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 LGALS14Q8TCE9 139 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 NUDT16L1Q9BRJ7 211 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 CHST6Q9GZX3 395 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 SHARPINQ9H0F6 387 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 ATG5Q9H1Y0 275 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 NCOR1P1Q9H4R4 102 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 LPAR2Q9HBW0 351 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 HIF1ANQ9NWT6 349 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 CCDC59Q9P031 241 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 RCC2Q9P258 522 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 RPUSD1Q9UJJ7 312 aaKnown RBP16.65■□□□□ 0.26
USP53-203ENST00000507597 HSF4Q9ULV5 492 aa16.65■□□□□ 0.26
USP53-203ENST00000507597 TRAV24A0A0B4J272 114 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 TMEM82A0PJX8 343 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 PSPNO60542 156 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 PPIAL4GP0DN37 164 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 OR3A1P47881 315 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 SPCS2Q15005 226 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 KRBOX4Q5JUW0 171 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 OR4S1Q8NGB4 309 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 S100A16Q96FQ6 103 aaKnown RBP16.64■□□□□ 0.25
USP53-203ENST00000507597 PPA2Q9H2U2 334 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 RIMS4Q9H426 269 aaPredicted RBP16.64■□□□□ 0.25
USP53-203ENST00000507597 RAB9BQ9NP90 201 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 OR6C3Q9NZP0 311 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 ADAM30Q9UKF2 790 aa16.64■□□□□ 0.25
USP53-203ENST00000507597 CSMD1Q96PZ7 3565 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 IGHV2-70DA0A0C4DH43 119 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 KIR2DS1A0A191URI9 304 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 A0A1B0GW55 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 KIAA1324LA8MWY0 1029 aaPredicted RBP16.63■□□□□ 0.25
USP53-203ENST00000507597 PAHP00439 452 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 TFF1P04155 84 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L2P0CJ85 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L3P0CJ86 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L4P0CJ87 422 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L5P0CJ88 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L6P0CJ89 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 DUX4L7P0CJ90 424 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 SELLP14151 372 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 ZFP36P26651 326 aaKnown RBP16.63■□□□□ 0.25
USP53-203ENST00000507597 P2RX3P56373 397 aa16.63■□□□□ 0.25
USP53-203ENST00000507597 PAX5Q02548 391 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms