RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 LIM2P55344 173 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CCL23P55773 120 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 KRTAP10-12P60413 245 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 IRF4Q15306 451 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 NSDHLQ15738 373 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 C4orf26Q17RF5 130 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 LRRC26Q2I0M4 334 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CEACAM16Q2WEN9 425 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 SCGB2B2Q4G0G5 96 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 C14orf28Q4W4Y0 310 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 MUC21Q5SSG8 566 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 ZNF790Q6PG37 636 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CNIH2Q6PI25 160 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 AGTRAPQ6RW13 159 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 SLC16A13Q7RTY0 426 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CARM1Q86X55 608 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CALHM3Q86XJ0 350 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 DOLPP1Q86YN1 238 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 FBXO16Q8IX29 292 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 IFT20Q8IY31 132 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 C20orf196Q8IYI0 205 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR4D11Q8NGI4 311 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR51A2Q8NGJ7 313 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR10G9Q8NGN4 311 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR10G8Q8NGN5 311 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR10G7Q8NGN6 311 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR5J2Q8NH18 312 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR4X1Q8NH49 305 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR2T6Q8NHC8 308 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 ZNF420Q8TAQ5 688 aaPredicted RBP2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 NEIL3Q8TAT5 605 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 BLNKQ8WV28 456 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 PPCDCQ96CD2 204 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 RNF157Q96PX1 679 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 EFCAB11Q9BUY7 163 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 RIOK2Q9BVS4 552 aaKnown RBP2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 EIF5A2Q9GZV4 153 aaKnown RBP2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR51E2Q9H255 320 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 SH3BGRL3Q9H299 93 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 POMKQ9H5K3 350 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 RNF167Q9H6Y7 350 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 HES4Q9HCC6 221 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 TMEM9BQ9NQ34 198 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 OCIAD1Q9NX40 245 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 MED29Q9NX70 200 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 TAAR2Q9P1P5 351 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 VSIG4Q9Y279 399 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 ZNF780BQ9Y6R6 833 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 V9GY05 133 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CCDC144AA2RUR9 1427 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 MIA2Q96PC5 1412 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 PDS5BQ9NTI5 1447 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 CLUHO75153 1309 aa2.92□□□□□ -1.94
HMGB3P15-201ENST00000507326 PLXNC1O60486 1568 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 SAMD9LQ8IVG5 1584 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 A2MP01023 1474 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 MAGI1Q96QZ7 1491 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 IFT172Q9UG01 1749 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 DEPDC5O75140 1603 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 TRPM1Q7Z4N2 1603 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 TRAV39A0A0B4J263 110 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 A0A0X1KG70 313 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 C5orf49A4QMS7 147 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 H7C1C5 153 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 M0QYV0 167 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 DEGS1O15121 323 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 TRMUO75648 421 aaKnown RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 ARL6IP5O75915 188 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 PIAS1O75925 651 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 YIF1AO95070 293 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 AIFM1O95831 613 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 TTRP02766 147 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 CRYGDP07320 174 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 LIFP15018 202 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 FOLR1P15328 257 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 CD1DP15813 335 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 PAX1P15863 534 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 SELEP16581 610 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 RAB3BP20337 219 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 SHC1P29353 583 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 FMO3P31513 532 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 KIR2DS2P43631 304 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 OR1D4P47884 311 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 MARCKSL1P49006 195 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 RBP2P50120 134 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 SLC18A1P54219 525 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 EMP1P54849 157 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 H2BFSP57053 126 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 KLF3P57682 345 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 B3GALT5-AS1P59052 145 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 LCN6P62502 163 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 RPS27AP62979 156 aaKnown RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 PSG4Q00888 419 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 EMX2Q04743 252 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 CD300CQ08708 224 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 PAFAH1B3Q15102 231 aaKnown RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 IAH1Q2TAA2 248 aaPredicted RBP2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 TTC32Q5I0X7 151 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 VAX1Q5SQQ9 334 aa2.91□□□□□ -1.94
HMGB3P15-201ENST00000507326 DNLZQ5SXM8 178 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms