RNA–Protein interactions for RNA: ENST00000506679.5

GYPB-207, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 606 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-207ENST00000506679 A0A1B0GW15 77 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 F8VP50 259 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 RNASEK-C17orf49H0YIS7 233 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 C3orf84H3BNL1 204 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 K7EPK0 472 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 RGS5O15539 181 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 LDOC1O95751 146 aaPredicted RBP1.09□□□□□ -2.23
GYPB-207ENST00000506679 CXorf1O96002 111 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 IGHV3-53P01767 116 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 RLN2P04090 185 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CECR9P0C854 216 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 TAC1P20366 129 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 PRTN3P24158 256 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 PSMB9P28065 219 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 IL12BP29460 328 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CCL23P55773 120 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 ENDOGQ14249 297 aaKnown RBP1.09□□□□□ -2.23
GYPB-207ENST00000506679 ELOCQ15369 112 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 OR4D1Q15615 310 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 SSX1Q16384 188 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CEACAM16Q2WEN9 425 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 BSXQ3C1V8 233 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 TTMPQ5BVD1 217 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 PAGE2Q7Z2X7 111 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 FAM19A1Q7Z5A9 133 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 SYCE1Q8N0S2 351 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 C17orf78Q8N4C9 275 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 C3orf22Q8N5N4 141 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CDRT4Q8N9R6 151 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 OR4K17Q8NGC6 315 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 OR2Y1Q8NGV0 311 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 C22orf15Q8WYQ4 148 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 RBPMSQ93062 196 aaKnown RBP1.09□□□□□ -2.23
GYPB-207ENST00000506679 OTUB2Q96DC9 234 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CPB2Q96IY4 423 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 YPEL4Q96NS1 127 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 BIRC8Q96P09 236 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 STACQ99469 402 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 THTPAQ9BU02 230 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 SRRQ9GZT4 340 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 PLEKHA1Q9HB21 404 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 TMBIM4Q9HC24 238 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 TAC3Q9UHF0 121 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 CLEC2DQ9UHP7 191 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 SLC22A14Q9Y267 594 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 KLF13Q9Y2Y9 288 aaPredicted RBP1.09□□□□□ -2.23
GYPB-207ENST00000506679 SAMHD1Q9Y3Z3 626 aaKnown RBP1.09□□□□□ -2.23
GYPB-207ENST00000506679 FADS3Q9Y5Q0 445 aa1.09□□□□□ -2.23
GYPB-207ENST00000506679 BRD4O60885 1362 aaPredicted RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 NOS1P29475 1434 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 ICE1Q9Y2F5 2266 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 A0A1W2PRG6 482 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 ERICH2A1L162 156 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 PGPA6NDG6 321 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 SDHAF1A6NFY7 115 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 GGTLC3B5MD39 225 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 FABP7O15540 132 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 ENSAO43768 121 aaKnown RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 COX7A2P2O60397 106 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 IGHMP01871 453 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 SCGB1C2P0DMR2 95 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 SLC2A1P11166 492 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 PTHLHP12272 177 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 MLNP12872 115 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 NQO2P16083 231 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 IMPA1P29218 277 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 LCN1P31025 176 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 GCLMP48507 274 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 PSMD8P48556 350 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 CD164Q04900 197 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 BAXQ07812 192 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 STX3Q13277 289 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 ANGPT1Q15389 498 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 TRAM1Q15629 374 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 TRIP13Q15645 432 aaPredicted RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 CEACAM21Q3KPI0 293 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 Q499Y3 187 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 UBE2NLQ5JXB2 153 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 LAMTOR1Q6IAA8 161 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 TMPPEQ6ZT21 453 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 SSX7Q7RTT5 188 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 LINC00596Q86U02 117 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 LRRC6Q86X45 466 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 OR8S1Q8NH09 359 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 SCGB1C1Q8TD33 95 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 CASTOR1Q8WTX7 329 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 BLNKQ8WV28 456 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 RORBQ92753 470 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 TMIGD2Q96BF3 282 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 PPWD1Q96BP3 646 aaKnown RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 ZMYND19Q96E35 227 aaPredicted RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 ATP6V1G3Q96LB4 118 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 CATSPER2Q96P56 530 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 CYTH2Q99418 400 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 APOL4Q9BPW4 351 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 ACBD6Q9BR61 282 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 BEX2Q9BXY8 128 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 CHMP4BQ9H444 224 aaKnown RBP1.08□□□□□ -2.24
GYPB-207ENST00000506679 ASB7Q9H672 318 aa1.08□□□□□ -2.24
GYPB-207ENST00000506679 TREM1Q9NP99 234 aa1.08□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms