RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 OR2F2O95006 317 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 CRHP06850 196 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 SLC35G6P0C7Q6 338 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 RAB3BP20337 219 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 F2RP25116 425 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 XIAPP98170 497 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 GBE1Q04446 702 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 EBI3Q14213 229 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 OR7A5Q15622 319 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L9Q6RFH8 374 aaPredicted RBP3.65□□□□□ -1.83
HERC4-213ENST00000506515 RTL4Q6ZR62 310 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 CMC1Q7Z7K0 106 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 SAXO1Q8IYX7 474 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 OR2A1Q8NGT9 310 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 OR8K3Q8NH51 312 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 OR5W2Q8NH69 310 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 EEF1AKMT3Q96AZ1 226 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 DNAJC1Q96KC8 554 aaKnown RBP3.65□□□□□ -1.83
HERC4-213ENST00000506515 PRRC1Q96M27 445 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 CCL19Q99731 98 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 HAUS4Q9H6D7 363 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 RETNQ9HD89 108 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 NLE1Q9NVX2 485 aaPredicted RBP3.65□□□□□ -1.83
HERC4-213ENST00000506515 CCDC59Q9P031 241 aaKnown RBP3.65□□□□□ -1.83
HERC4-213ENST00000506515 MMACHCQ9Y4U1 282 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 HEATR5BQ9P2D3 2071 aa3.65□□□□□ -1.83
HERC4-213ENST00000506515 IGKV2D-24A0A075B6R9 120 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 A0A1W2PP18 115 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 EIF4E2O60573 245 aaKnown RBP3.64□□□□□ -1.83
HERC4-213ENST00000506515 CATP04040 527 aaKnown RBP3.64□□□□□ -1.83
HERC4-213ENST00000506515 HLA-DPB1P04440 258 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 PGAM1P18669 254 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 MSNP26038 577 aaKnown RBP3.64□□□□□ -1.83
HERC4-213ENST00000506515 CEACAM3P40198 252 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 CRISP1P54107 249 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 THEM4Q5T1C6 240 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 PTRHD1Q6GMV3 140 aaKnown RBP3.64□□□□□ -1.83
HERC4-213ENST00000506515 ARL9Q6T311 187 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 PLET1Q6UQ28 207 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 UGT2A3Q6UWM9 527 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 PGAM4Q8N0Y7 254 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 PQLC3Q8N755 202 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 MORN4Q8NDC4 146 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 OR2M7Q8NG81 312 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 OR10G2Q8NGC3 310 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 LYPD6BQ8NI32 183 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 TM4SF18Q96CE8 201 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 OLFM3Q96PB7 478 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 MICU1Q9BPX6 476 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 SFXN3Q9BWM7 321 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 ZNF222Q9UK12 451 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 ARL5AQ9Y689 179 aa3.64□□□□□ -1.83
HERC4-213ENST00000506515 SNRNP200O75643 2136 aaKnown RBP3.64□□□□□ -1.83
HERC4-213ENST00000506515 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.63□□□□□ -1.834e-6■■■■□ 24.8
HERC4-213ENST00000506515 TRBV9A0A0B4J1U6 114 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 A0A1B0GVX0 72 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 A0A1B0GW55 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 LYRM9A8MSI8 78 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TEX46H3BTG2 121 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TP53I11O14683 189 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 PRMT5O14744 637 aaPredicted RBP3.63□□□□□ -1.83
HERC4-213ENST00000506515 AIREO43918 545 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 GLSO94925 669 aaPredicted RBP3.63□□□□□ -1.83
HERC4-213ENST00000506515 BCHEP06276 602 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L2P0CJ85 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L3P0CJ86 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L5P0CJ88 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L6P0CJ89 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4L7P0CJ90 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 GGT1P19440 569 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 ATP5J2P56134 94 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TPM4P67936 248 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 ZNF726P1Q15940 193 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 CEMP1Q6PRD7 247 aaPredicted RBP3.63□□□□□ -1.83
HERC4-213ENST00000506515 C12orf54Q6X4T0 127 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 ZNF567Q8N184 647 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TEX29Q8N6K0 151 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 NUBPLQ8TB37 319 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TBL1YQ9BQ87 522 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 BPIFA3Q9BQP9 254 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 REG4Q9BYZ8 158 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 TTTY12Q9BZ98 90 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 BEX1Q9HBH7 125 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 FAIMQ9NVQ4 179 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 ZNHIT6Q9NWK9 470 aaKnown RBP3.63□□□□□ -1.83
HERC4-213ENST00000506515 LYARQ9NX58 379 aaKnown RBP3.63□□□□□ -1.83
HERC4-213ENST00000506515 DUX4Q9UBX2 424 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 PKD1L1Q8TDX9 2849 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 ZANQ9Y493 2812 aa3.63□□□□□ -1.83
HERC4-213ENST00000506515 SCN3AQ9NY46 2000 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 EEF1E1-BLOC1S5C9J1V9 151 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 SMKR1H3BMG3 65 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 H7C0C1 242 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 WRBO00258 174 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 EEF1E1O43324 174 aaKnown RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 CST8O60676 142 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 RDH16O75452 317 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 RCBTB2O95199 551 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 STATHP02808 62 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 TPM3P06753 285 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms