RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 XKRY2A2RUG3 117 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF705GA8MUZ8 300 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 ETV2O00321 342 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 PRKNO60260 465 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 CTSBP07858 339 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 TDGF1P3P51864 188 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 BTNL3Q6UXE8 466 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 C1QL2Q7Z5L3 287 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 CENPVQ7Z7K6 275 aaPredicted RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 OR2V1Q8NHB1 315 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM171Q8WVE6 324 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 HIST1H2AAQ96QV6 131 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 SNHG12Q9BXW3 62 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 TMEM222Q9H0R3 208 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 PNRC2Q9NPJ4 139 aaKnown RBP13.81□□□□□ -0.2
SCLT1-208ENST00000506368 SERINC1Q9NRX5 453 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 PLSCR2Q9NRY7 297 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 MYOTQ9UBF9 498 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 COPS7AQ9UBW8 275 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 NAT8Q9UHE5 227 aa13.81□□□□□ -0.2
SCLT1-208ENST00000506368 C3orf85A0A1B0GTC6 90 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 FCGR2AP12318 317 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 KIR2DL1P43626 348 aaPredicted RBP13.8□□□□□ -0.2
SCLT1-208ENST00000506368 HERV-K104P61576 105 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 PPP1CAP62136 330 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 C1orf194Q5T5A4 169 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 FAM57BQ71RH2 274 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 MRGPRGQ86SM5 289 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 IL22RA1Q8N6P7 574 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 SPSB1Q96BD6 273 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 PGAM5Q96HS1 289 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 OR5B12Q96R08 314 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 GABRG3Q99928 467 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 TPSD1Q9BZJ3 242 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 WWTR1Q9GZV5 400 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 LIME1Q9H400 295 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 Q9N2K0 584 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 NXT1Q9UKK6 140 aaKnown RBP13.8□□□□□ -0.2
SCLT1-208ENST00000506368 LRP4O75096 1905 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 CUL9Q8IWT3 2517 aa13.8□□□□□ -0.2
SCLT1-208ENST00000506368 KIR2DL5BA0A0G2JN68 375 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 KIR2DL5BA0A0G2JPC4 375 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PROB1E7EW31 1015 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 DLEU1O43261 78 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PIAS2O75928 621 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 IFNA5P01569 189 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PFN1P07737 140 aaKnown RBP13.79□□□□□ -0.2
SCLT1-208ENST00000506368 IL11P20809 199 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 DYNLT3P51808 116 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PAX5Q02548 391 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 HHEXQ03014 270 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 COL10A1Q03692 680 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 SLC25A47Q6Q0C1 308 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 UEVLDQ8IX04 471 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 KIR2DL5AQ8N109 375 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 NAXEQ8NCW5 288 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 OR5L1Q8NGL2 311 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PATE1Q8WXA2 126 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 PSMG3Q9BT73 122 aaPredicted RBP13.79□□□□□ -0.2
SCLT1-208ENST00000506368 CHRNA10Q9GZZ6 450 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF319Q9P2F9 582 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 GOLT1BQ9Y3E0 138 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 LIPT2A6NK58 231 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 VSTM2BA6NLU5 285 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 M0R296 226 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 DRD1P21728 446 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 UCP1P25874 307 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 NTSR1P30989 418 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 ID3Q02535 119 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 ZFP36L1Q07352 338 aaKnown RBP13.79□□□□□ -0.2
SCLT1-208ENST00000506368 C17orf67Q0P5P2 114 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 EXT1Q16394 746 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 CYP2G1PQ6ZSU1 146 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 IL22RA2Q969J5 263 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 CALHM2Q9HA72 323 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 HS3ST3A1Q9Y663 406 aa13.79□□□□□ -0.2
SCLT1-208ENST00000506368 MPPED1O15442 326 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 PHLDA2Q53GA4 152 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF787Q6DD87 383 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF695Q8IW36 515 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 OR5D18Q8NGL1 313 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 CA5BP1Q8WTZ4 195 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ANAPC16Q96DE5 110 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 REEP6Q96HR9 211 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 IMMP2LQ96T52 175 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ELL3Q9HB65 397 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-208ENST00000506368 GNG13Q9P2W3 67 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 NKX2-6A6NCS4 301 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 H0Y8X5 98 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 KLF8O95600 359 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-208ENST00000506368 TYMSP04818 313 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 RPLP1P05386 114 aaKnown RBP13.78□□□□□ -0.2
SCLT1-208ENST00000506368 FXYD4P59646 89 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ANKRD39Q53RE8 183 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 NCR3LG1Q68D85 454 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 WDR5BQ86VZ2 330 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 CISD2Q8N5K1 135 aaKnown RBP13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF441Q8N8Z8 693 aa13.78□□□□□ -0.2
SCLT1-208ENST00000506368 ZNF845Q96IR2 970 aaPredicted RBP13.78□□□□□ -0.2
SCLT1-208ENST00000506368 SIT1Q9Y3P8 196 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms