RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 ACOT13Q9NPJ3 140 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 MRPS28Q9Y2Q9 187 aaKnown RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 SF3B6Q9Y3B4 125 aaKnown RBP13.68□□□□□ -0.22
SNCA-209ENST00000506244 FAM96BQ9Y3D0 163 aa13.68□□□□□ -0.22
SNCA-209ENST00000506244 DNAJC9-AS1A6NH13 148 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 RNASEK-C17orf49H0YIS7 233 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 CLDN34H7C241 214 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 SLC33A1O00400 549 aaPredicted RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 NPFFO15130 113 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 ARL6IP5O75915 188 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 FBP1P09467 338 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 UCHL1P09936 223 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 ZNF728P0DKX0 622 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 GTF2F2P13984 249 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 CCL3L1P16619 93 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 SERPINA2P20848 420 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 GABRA5P31644 462 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 KCNJ3P48549 501 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 UBA52P62987 128 aaKnown RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 DEFB112Q30KQ8 113 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 SLC22A6Q4U2R8 563 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 PAN3Q58A45 887 aaKnown RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 GLT8D1Q68CQ7 371 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 Q6P435 159 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 TRAPPC6BQ86SZ2 158 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 PHC2Q8IXK0 858 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 PDZD9Q8IXQ8 264 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 ZDHHC22Q8N966 263 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 SPATA3Q8NHX4 192 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 FCGR1BQ92637 280 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 TNFRSF14Q92956 283 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 MUL1Q969V5 352 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 MRPS24Q96EL2 167 aaKnown RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 NKX3-1Q99801 234 aaPredicted RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 GAL3ST2Q9H3Q3 398 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 PRDM13Q9H4Q3 707 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 GHRLQ9UBU3 117 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 ST3GAL6Q9Y274 331 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 UBE2J1Q9Y385 318 aaPredicted RBP13.67□□□□□ -0.22
SNCA-209ENST00000506244 COL6A5A8TX70 2615 aa13.67□□□□□ -0.22
SNCA-209ENST00000506244 TRGV10A0A0A0MS01 117 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 A0A0G2JK05 382 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 C17orf98A8MV24 154 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 PAHP00439 452 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 UBBP0CG47 229 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 ACTG1P63261 375 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 KLRD1Q13241 179 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 MPV17LQ2QL34 196 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 PIGYQ3MUY2 71 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 GLIPR1L1Q6UWM5 242 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 TMEM86BQ8N661 226 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 TMEM203Q969S6 136 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 IFT22Q9H7X7 185 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 ESM1Q9NQ30 184 aa13.66□□□□□ -0.22
SNCA-209ENST00000506244 RRP9O43818 475 aaKnown RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 CLPXO76031 633 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 OR7C1O76099 320 aaPredicted RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 RNASE1P07998 156 aaKnown RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 SAA4P35542 130 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 RANBP1P43487 201 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 DLX6P56179 175 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 RPS25P62851 125 aaKnown RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 EMX1Q04741 257 aaPredicted RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 INSL4Q14641 139 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 ATXN7L3Q14CW9 347 aaPredicted RBP13.65□□□□□ -0.22
SNCA-209ENST00000506244 MIDNQ504T8 468 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 KRBOX4Q5JUW0 171 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 FAM27D1Q5T7N8 215 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 TPRX1Q8N7U7 411 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 OR13D1Q8NGV5 346 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 SSMEM1Q8WWF3 244 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 CST11Q9H112 138 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 SPACA1Q9HBV2 294 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 OR6C3Q9NZP0 311 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 POMT1Q9Y6A1 747 aa13.65□□□□□ -0.22
SNCA-209ENST00000506244 DSCAML1Q8TD84 2053 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 A0A0U1RQK1 487 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 MDFIC2A0A1B0GVS7 189 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 ODAMA1E959 279 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 MEIOCA2RUB1 952 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 H3BUI4 141 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 HSPB6O14558 160 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 SRMP19623 302 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 PAX5Q02548 391 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 AESQ08117 197 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 Q6YL49 198 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 TCF23Q7RTU1 214 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 LDLRAD3Q86YD5 345 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 PIP4P2Q8N4L2 257 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
SNCA-209ENST00000506244 OR4D6Q8NGJ1 314 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 BARHL1Q9BZE3 327 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 NDUFB11Q9NX14 153 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 TAS2R3Q9NYW6 316 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 LRRC42Q9Y546 428 aa13.64□□□□□ -0.23
SNCA-209ENST00000506244 FBN1P35555 2871 aaKnown RBP13.64□□□□□ -0.23
SNCA-209ENST00000506244 TRAV24A0A0B4J272 114 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 BTBD17A6NE02 478 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 HOXA3O43365 443 aaPredicted RBP13.63□□□□□ -0.23
SNCA-209ENST00000506244 IGHV1-8P0DP01 117 aa13.63□□□□□ -0.23
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