RNA–Protein interactions for RNA: ENST00000504951.6

GYPB-204, Transcript of glycophorin B (MNS blood group), humanhuman

TSL 1 (best)

Gene GYPB, Length 632 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPB-204ENST00000504951 ZNF260Q3ZCT1 412 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 SPATS1Q496A3 300 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 FAM98BQ52LJ0 330 aaKnown RBP4.68□□□□□ -1.66
GYPB-204ENST00000504951 HSP90B2PQ58FF3 399 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 SLC35D3Q5M8T2 416 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 UTF1Q5T230 341 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 ZNF684Q5T5D7 378 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 ACSM6Q6P461 480 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 LCNL1Q6ZST4 164 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 ASRGL1Q7L266 308 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 FOXRED2Q8IWF2 684 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 ZNF679Q8IYX0 411 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 ADGRG5Q8IZF4 528 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 OR8H2Q8N162 312 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 Q8N1Y9 231 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 STPG2Q8N412 459 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 C5orf56Q8N8D9 126 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 OR52N4Q8NGI2 321 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 OR14K1Q8NGZ2 314 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 NDNFQ8TB73 568 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 TRMT10AQ8TBZ6 339 aaKnown RBP4.68□□□□□ -1.66
GYPB-204ENST00000504951 C4orf3Q8WVX3 66 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 DDB2Q92466 427 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 CORO2AQ92828 525 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 SNX22Q96L94 193 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 LRGUKQ96M69 825 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 APOL4Q9BPW4 351 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 CADM1Q9BY67 442 aaKnown RBP4.68□□□□□ -1.66
GYPB-204ENST00000504951 YIPF3Q9GZM5 350 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 MED4Q9NPJ6 270 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 MTCH1Q9NZJ7 389 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 NUFIP1Q9UHK0 495 aaKnown RBP4.68□□□□□ -1.66
GYPB-204ENST00000504951 ENPP5Q9UJA9 477 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 SLC22A13Q9Y226 551 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 V9GYS6 101 aa4.68□□□□□ -1.66
GYPB-204ENST00000504951 FAM172BPA6NC97 362 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ARRDC5A6NEK1 342 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 SERPINE3A8MV23 424 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 LOC110117498-PIK3R3F6TDL0 507 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 BUB1B-PAK6H3BSN5 160 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 AP4M1O00189 453 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 DLGAP1O14490 977 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 PRKYO43930 277 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 PSPNO60542 156 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 E2F6O75461 281 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CST1P01037 141 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 HMGN1P05114 100 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 OR8U8P0C7N1 319 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 T-ENOLP0DO92 83 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CALCBP10092 127 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 RAP2AP10114 183 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 GP9P14770 177 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 DUSP1P28562 367 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 EPHA2P29317 976 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 GDNFP39905 211 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 MNDAP41218 407 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 GLIPR1P48060 266 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CFHR3Q02985 330 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 EDDM3AQ14507 147 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 UBE2V2Q15819 145 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 SNAPC1Q16533 368 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ODF4Q2M2E3 257 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CXorf66Q5JRM2 361 aaPredicted RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 CLVS2Q5SYC1 327 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 DEGS2Q6QHC5 323 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 HEPN1Q6WQI6 88 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 Q6ZSR3 168 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 SSX6Q7RTT6 188 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 OVCH2Q7RTZ1 564 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ZNF573Q86YE8 665 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ELMOD2Q8IZ81 293 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ABHD12Q8N2K0 398 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ZNF676Q8N7Q3 588 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ASCC1Q8N9N2 400 aaKnown RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 BCAS4Q8TDM0 211 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 GATAD1Q8WUU5 269 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CANT1Q8WVQ1 401 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 LINC00476Q8WZB0 136 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 SLAMF9Q96A28 289 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CCDC124Q96CT7 223 aaKnown RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 RBMXL1Q96E39 390 aaKnown RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 RNFT2Q96EX2 444 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 UBE2E2Q96LR5 201 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 MROQ9BYG7 248 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 CHST6Q9GZX3 395 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ADGRL4Q9HBW9 690 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 SLC25A19Q9HC21 320 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 NDE1Q9NXR1 346 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 TAS2R3Q9NYW6 316 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 TVP23BQ9NYZ1 205 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 MRM2Q9UI43 246 aaKnown RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 OR52A1Q9UKL2 312 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 GTF2A1LQ9UNN4 478 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 POLDIP2Q9Y2S7 368 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 ARL2BPQ9Y2Y0 163 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 UBE2J1Q9Y385 318 aaPredicted RBP4.67□□□□□ -1.66
GYPB-204ENST00000504951 PCLOQ9Y6V0 5065 aa4.67□□□□□ -1.66
GYPB-204ENST00000504951 DNAH10Q8IVF4 4471 aa4.66□□□□□ -1.66
GYPB-204ENST00000504951 FAM230AA0A1W2PPH8 454 aa4.66□□□□□ -1.66
GYPB-204ENST00000504951 I3L521 148 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms