RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 SLC23A2Q9UGH3 650 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 SHPKQ9UHJ6 478 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 MRM2Q9UI43 246 aaKnown RBP3.54□□□□□ -1.84
RFC1-208ENST00000504849 PILRBQ9UKJ0 227 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 RAB22AQ9UL26 194 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 PROCRQ9UNN8 238 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 FARSAQ9Y285 508 aaKnown RBP3.54□□□□□ -1.84
RFC1-208ENST00000504849 OR2W1Q9Y3N9 320 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 CSAG2Q9Y5P2 127 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 SLC22A7Q9Y694 548 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 VWA8A3KMH1 1905 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 PLXNB3Q9ULL4 1909 aa3.54□□□□□ -1.84
RFC1-208ENST00000504849 ZFHX2Q9C0A1 2572 aaPredicted RBP3.54□□□□□ -1.84
RFC1-208ENST00000504849 ACACBO00763 2458 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 FAM208BQ5VWN6 2430 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 USP9XQ93008 2570 aaPredicted RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 ALPK3Q96L96 1907 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 A0A087WUJ7 227 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 NPIPA5A0A0B4J1W7 369 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PPIAL4CA0A0B4J2A2 164 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 C9orf170A2RU37 121 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 MEIS3P1A6NDR6 274 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 EEF1E1-BLOC1S5C9J1V9 151 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 C4orf51C9J302 202 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 NPIPA7E9PJI5 369 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RNASEK-C17orf49H0YIS7 233 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 MFNGO00587 321 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 OR2T1O43869 369 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 MED6O75586 246 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 STK17BO94768 372 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CLDN14O95500 239 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 DUS4LO95620 317 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 CSTAP01040 98 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CRHP06850 196 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ERCC1P07992 297 aaPredicted RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 FBP1P09467 338 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 SFTA3P0C7M3 94 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CISD3P0C7P0 127 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 SLC35E2P0CK97 266 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 STAG3L3P0CL85 134 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 NPIPA8P0DM63 369 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PPIAL4GP0DN37 164 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 IGHV4-31P0DP07 118 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PTHLHP12272 177 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PGAM2P15259 253 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 HPGDP15428 266 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ALOX5APP20292 161 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 GRPRP30550 384 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 HOXD3P31249 432 aaPredicted RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 PMELP40967 661 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 P2RY2P41231 377 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 GLP1RP43220 463 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 KCNJ3P48549 501 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CSNK1EP49674 416 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 THBS3P49746 956 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CAV2P51636 162 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ARHGDIBP52566 201 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RIDAP52758 137 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 DVL1P1P54792 670 aaPredicted RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 RAB38P57729 211 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RPS4XP62701 263 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 RPS15P62841 145 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 BIKQ13323 160 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PPP1R1AQ13522 171 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RHEBQ15382 184 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ZNF74Q16587 644 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PCK2Q16822 640 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 DEFB134Q4QY38 66 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TRMT12Q53H54 448 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 TEX30Q5JUR7 227 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 LINC01590Q5TEZ4 76 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PRAMEF5Q5TYX0 476 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TMEM244Q5VVB8 128 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PRAMEF6Q5VXH4 476 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CARD17Q5XLA6 110 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TMEM215Q68D42 235 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TCEAL6Q6IPX3 200 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 PRSS54Q6PEW0 395 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 DNM1P34Q6PK57 102 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 OPN5Q6U736 354 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 C5orf46Q6UWT4 87 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 GFRALQ6UXV0 394 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 TRAPPC6BQ86SZ2 158 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 NAA40Q86UY6 237 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 ANGPTL5Q86XS5 388 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CACUL1Q86Y37 369 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 STX12Q86Y82 276 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 OR1J1Q8NGS3 322 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RNASE11Q8TAA1 199 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 CD99L2Q8TCZ2 262 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CASTOR1Q8WTX7 329 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 LIPHQ8WWY8 451 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 FGF13Q92913 245 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 Q96M85 177 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 DEFB118Q96PH6 123 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 RBM14Q96PK6 669 aaKnown RBP3.53□□□□□ -1.84
RFC1-208ENST00000504849 OR5B2Q96R09 309 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 S100A13Q99584 98 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 MICU1Q9BPX6 476 aa3.53□□□□□ -1.84
RFC1-208ENST00000504849 CMSS1Q9BQ75 279 aaKnown RBP3.53□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms