RNA–Protein interactions for RNA: ENST00000504788.5

LMNB1-208, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 1,801 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-208ENST00000504788 MIXL1Q9H2W2 232 aa4.08□□□□□ -1.76
LMNB1-208ENST00000504788 DAPK2Q9UIK4 370 aa4.08□□□□□ -1.76
LMNB1-208ENST00000504788 ELF5Q9UKW6 265 aaPredicted RBP4.08□□□□□ -1.76
LMNB1-208ENST00000504788 SMIM31A0A1B0GVY4 71 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 H7C1Q1 480 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MFNGO00587 321 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 TMPRSS2O15393 492 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MAGEB3O15480 346 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 PHF1O43189 567 aaPredicted RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ADAM20O43506 726 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 HTR3BO95264 441 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NAPSAO96009 420 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 FSHBP01225 129 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 GTF2F2P13984 249 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF182P17025 639 aaPredicted RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RAB6AP20340 208 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MYL9P24844 172 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SERPINB10P48595 397 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 IL13RA1P78552 427 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 DYNC1I2Q13409 638 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 GPR176Q14439 515 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MPV17LQ2QL34 196 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 C11orf91Q3C1V1 193 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 UTF1Q5T230 341 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RSBN1Q5VWQ0 802 aaPredicted RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF880Q6PDB4 577 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 USP43Q70EL4 1123 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 LINC00596Q86U02 117 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 OR8H2Q8N162 312 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SPICQ8N5J4 248 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 Q8N7P7 452 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 PNLDC1Q8NA58 520 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 KCNG3Q8TAE7 436 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ST8SIA4Q92187 359 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 FAM46BQ96A09 425 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NEIL1Q96FI4 390 aaPredicted RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 DMRTB1Q96MA1 342 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 GPER1Q99527 375 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 GAL3ST1Q99999 423 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SOSTQ9BQB4 213 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SULT4A1Q9BR01 284 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 DCTN5Q9BTE1 182 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NCOR1P1Q9H4R4 102 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NARFLQ9H6Q4 476 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 LINC00574Q9H8X3 128 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ELL3Q9HB65 397 aaPredicted RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MIOXQ9UGB7 285 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 OPN4Q9UHM6 478 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 HSF4Q9ULV5 492 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SPATA2Q9UM82 520 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 A0A075B6Q4 140 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 KIR2DS1A0A191URI9 304 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 J3QL48 77 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CTDSP2O14595 271 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 PDCD5O14737 125 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CYB5AP00167 134 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 HLA-DQB1P01920 261 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CHRM2P08172 466 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MELTFP08582 738 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 IRF2P14316 349 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ERP29P30040 261 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 BMXP51813 675 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 PAX8Q06710 450 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RSU1Q15404 277 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RAB11BQ15907 218 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 HCP5Q6MZN7 132 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ZNF497Q6ZNH5 498 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 C6orf201Q7Z4U5 140 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 C5orf24Q7Z6I8 188 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CMTM4Q8IZR5 234 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 BOLLQ8N9W6 283 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SUMF2Q8NBJ7 301 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CHST4Q8NCG5 386 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 DGCR14Q96DF8 476 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 TIMD4Q96H15 378 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 AJUBAQ96IF1 538 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 C18orf12Q96KH6 178 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SNX22Q96L94 193 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NUDT16L1Q9BRJ7 211 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 TMEM59Q9BXS4 323 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 TMPRSS13Q9BYE2 586 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SELENOIQ9C0D9 397 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 FAM192AQ9GZU8 254 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CST11Q9H112 138 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 SLITRK2Q9H156 845 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 UNKLQ9H9P5 680 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 PLGRKTQ9HBL7 147 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NEK6Q9HC98 313 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 C19orf12Q9NSK7 152 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 MBNL3Q9NUK0 354 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 CCDC59Q9P031 241 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ABRACLQ9P1F3 81 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RSL24D1Q9UHA3 163 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 RPUSD1Q9UJJ7 312 aaKnown RBP4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ITGB1BP2Q9UKP3 347 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 ING4Q9UNL4 249 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 INSIG2Q9Y5U4 225 aa4.07□□□□□ -1.76
LMNB1-208ENST00000504788 NAV3Q8IVL0 2385 aa4.06□□□□□ -1.76
LMNB1-208ENST00000504788 TRBV6-6A0A0A6YYG2 114 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms