RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 C9orf64Q5T6V5 341 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 METTL21CQ5VZV1 264 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FAM131AQ6UXB0 335 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NPSR1Q6W5P4 371 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MRPL55Q7Z7F7 128 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CROCCP2Q86T23 111 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TRPT1Q86TN4 253 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PPP1R27Q86WC6 154 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 C10orf107Q8IVU9 208 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RIMKLAQ8IXN7 391 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RDH10Q8IZV5 341 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 UMODL1-AS1Q8N2C9 162 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CBR4Q8N4T8 237 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SPICQ8N5J4 248 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NPWQ8N729 165 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 STPG4Q8N801 248 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 DCAF4L2Q8NA75 395 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PXT1Q8NFP0 134 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TSTD1Q8NFU3 115 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZFAND1Q8TCF1 268 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NEK7Q8TDX7 302 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RAB8BQ92930 207 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 MAGOHBQ96A72 148 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FGGYQ96C11 551 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CNRIP1Q96F85 164 aaPredicted RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 PGLYRP4Q96LB8 373 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 ZNF599Q96NL3 588 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RNF157Q96PX1 679 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 LITAFQ99732 161 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RASL11BQ9BPW5 248 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM208Q9BTX3 173 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CDCA4Q9BXL8 241 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 SRXN1Q9BYN0 137 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RNF167Q9H6Y7 350 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 KCNJ16Q9NPI9 418 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 CTNNBIP1Q9NSA3 81 aaPredicted RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 GID8Q9NWU2 228 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 COMMD9Q9P000 198 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 TMEM9Q9P0T7 183 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 FARSAQ9Y285 508 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 V9GY05 133 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NOTCH3Q9UM47 2321 aa3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 NYNRINQ9P2P1 1898 aaKnown RBP3.34□□□□□ -1.87
PDLIM1P4-201ENST00000504327 RALGAPA1Q6GYQ0 2036 aa3.34□□□□□ -1.88
PDLIM1P4-201ENST00000504327 GOLGA4Q13439 2230 aaKnown RBP3.34□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGF2RP11717 2491 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TNRC6BQ9UPQ9 1833 aaKnown RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CEP192Q8TEP8 1941 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 A0A0B4J2A0 478 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGHV2OR16-5A0A0B4J2B6 119 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGHV1OR15-9A0A0B4J2B8 117 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGHV3-38A0A0C4DH36 116 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TEX48A0A1B0GUV7 120 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FAM240AA0A1B0GVK7 77 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 PCNX2A6NKB5 2137 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 NCBP2LA6PVI3 153 aaKnown RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C10orf142B7Z368 130 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 G3V2L1 256 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CDX4O14627 284 aaPredicted RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ENTPD6O75354 484 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TTC4O95801 387 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 IGLV3-19P01714 112 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TYMSP04818 313 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CTSLP07711 333 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CT45A10P0DMU9 189 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CBR1P16152 277 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 M6PRP20645 277 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ALDH3A1P30838 453 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SERPINB5P36952 375 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 HSPA9P38646 679 aaKnown RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 KIR2DS4P43632 304 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MNAT1P51948 309 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 UBE2E1P51965 193 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RIDAP52758 137 aaKnown RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RAB38P57729 211 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 RANP62826 216 aaKnown RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FAM3AP98173 230 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 LPAL2Q16609 132 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MICAQ29983 383 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SLC25A35Q3KQZ1 300 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TMEM30BQ3MIR4 351 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 FHL5Q5TD97 284 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR2T5Q6IEZ7 315 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 C11orf71Q6IPW1 123 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CNIH2Q6PI25 160 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CASP12Q6UXS9 341 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 TMED4Q7Z7H5 227 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 STK40Q8N2I9 435 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ARRDC1Q8N5I2 433 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR1M1Q8NGA1 313 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR52E2Q8NGJ4 325 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR2A12Q8NGT7 310 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR2T29Q8NH02 315 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 OR51Q1Q8NH59 317 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ANKRD9Q96BM1 317 aaPredicted RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 SLC25A38Q96DW6 304 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 ZMYND19Q96E35 227 aaPredicted RBP3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 MRAP2Q96G30 205 aa3.33□□□□□ -1.88
PDLIM1P4-201ENST00000504327 CAPZA3Q96KX2 299 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms