RNA–Protein interactions for RNA: ENST00000503742.5

UBE2D3-216, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 1 (best)

Gene UBE2D3, Length 1,977 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-216ENST00000503742 C1orf174Q8IYL3 243 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 SUMF2Q8NBJ7 301 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 TMEM100Q9NV29 134 aa18.15■□□□□ 0.5
UBE2D3-216ENST00000503742 C3orf80F5H4A9 247 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 MLNRO43193 412 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 TMEM65Q6PI78 240 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 COQ8AQ8NI60 647 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 CITED4Q96RK1 184 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 RAB18Q9NP72 206 aa18.14■□□□□ 0.49
UBE2D3-216ENST00000503742 SHANK1Q9Y566 2161 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 LINC00862A6NCI5 91 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF205O95201 554 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 KNG1P01042 644 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 PGA5P0DJD9 388 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 SLC25A4P12235 298 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 RPA2P15927 270 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 FCGR2CP31995 323 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 MBNL2Q5VZF2 373 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 Q6P435 159 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 CISD2Q8N5K1 135 aaKnown RBP18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 PPP1R1CQ8WVI7 109 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 S100PBPQ96BU1 408 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 NRIP2Q9BQI9 281 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 TINAGQ9UJW2 476 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 TRBV6-6A0A0A6YYG2 114 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 FAM25EA8MYX2 175 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 CDIPTO14735 213 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 ACAA1P09110 424 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 SERPINF1P36955 418 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 NAAAQ02083 359 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 C3orf36Q3SXR2 165 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF718Q3SXZ3 478 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 MOB3AQ96BX8 217 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 RIMS4Q9H426 269 aaPredicted RBP18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 PRR13Q9NZ81 148 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 AUP1Q9Y679 476 aa18.13■□□□□ 0.49
UBE2D3-216ENST00000503742 ATMQ13315 3056 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 CRYM-AS1A6NIL9 109 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 HSPB6O14558 160 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 CRYZL1O95825 349 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF728P0DKX0 622 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 S100A11P31949 105 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 UCP3P55916 312 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 GSG1LQ6UXU4 331 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 TMUB2Q71RG4 321 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 DOLPP1Q86YN1 238 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 COMMD9Q9P000 198 aa18.12■□□□□ 0.49
UBE2D3-216ENST00000503742 A0A1B0GWJ7 208 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 GLP1RP43220 463 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 AP2S1P53680 142 aaPredicted RBP18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 IGSF11Q5DX21 431 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 C11orf87Q6NUJ2 197 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 MRPL30Q8TCC3 161 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 NEK7Q8TDX7 302 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 NMES1Q9C002 83 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 EEF1E1-BLOC1S5C9J1V9 151 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 HS3ST1O14792 307 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 CFDP00746 253 aaPredicted RBP18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 IFNA2P01563 188 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 RBM39Q14498 530 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 Q6ZR03 302 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 RDH5Q92781 318 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 TOMM40LQ969M1 308 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 PIK3IP1Q96FE7 263 aa18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 HEATR1Q9H583 2144 aaKnown RBP18.11■□□□□ 0.49
UBE2D3-216ENST00000503742 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 C5orf51A6NDU8 294 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 A8MXE2 369 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 LEUTXA8MZ59 168 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 PRRG2O14669 202 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 DEGS1O15121 323 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 TIMM8AO60220 97 aaPredicted RBP18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ADAP1O75689 374 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 FABP6P51161 128 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF880Q6PDB4 577 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF546Q86UE3 836 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 SGPP2Q8IWX5 399 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 C11orf53Q8IXP5 236 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 MFFQ9GZY8 342 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 CXXC4Q9H2H0 198 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 FZR1Q9UM11 496 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ATP23Q9Y6H3 246 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 TRDCB7Z8K6 153 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 IFNA7P01567 189 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 GRPP07492 148 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 M6PRP20645 277 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 AADACP22760 399 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 GCH1P30793 250 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF83P51522 516 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 PIGPP57054 158 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 EXOSC2Q13868 293 aaKnown RBP18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 ZNF146Q15072 292 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 C20orf204Q6ZNR8 217 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 TLNRD1Q9H1K6 362 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 HES4Q9HCC6 221 aa18.1■□□□□ 0.49
UBE2D3-216ENST00000503742 CEP295Q9C0D2 2601 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 KIR2DS1A0A191URI9 304 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 C13orf42A0A1B0GVH6 325 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 SHOXO15266 292 aa18.09■□□□□ 0.49
UBE2D3-216ENST00000503742 SLC34A2O95436 690 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms