RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 SOD1P00441 154 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 HLA-DQB2P05538 268 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 RHOCP08134 193 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 IGLC2P0DOY2 106 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 IGLC3P0DOY3 106 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CD99P14209 185 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TCN2P20062 427 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 PMCHP20382 165 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 IGFBP6P24592 240 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 NPY1RP25929 384 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 FCGR2BP31994 310 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CTRLP40313 264 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 H2BFSP57053 126 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CLRN1P58418 232 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TAS2R20P59543 309 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OSTNP61366 133 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 RPL8P62917 257 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 NTHL1P78549 312 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CTBP1Q13363 440 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CPSF6Q16630 551 aaKnown RBP eCLIP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 EMC4Q5J8M3 183 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 C6orf136Q5SQH8 315 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 HBMQ6B0K9 141 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 AMMECR1LQ6DCA0 310 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 FCRL6Q6DN72 434 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ZFAND6Q6FIF0 208 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OR2T5Q6IEZ7 315 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 MRPL54Q6P161 138 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF788Q6ZQV5 615 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 DET1Q7L5Y6 550 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 GPRIN1Q7Z2K8 1008 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM179BQ7Z7N9 219 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 MUC15Q8N387 334 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 DTWD1Q8N5C7 304 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 DEFB125Q8N687 156 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF676Q8N7Q3 588 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 GPR32P1Q8NGA4 272 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OR52R1Q8NGF1 315 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OR2T29Q8NH02 315 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OR4F5Q8NH21 305 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 OR4X1Q8NH49 305 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM170AQ8WVE7 144 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 UHRF2Q96PU4 802 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TRIB3Q96RU7 358 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 MYADMQ96S97 322 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TIMP4Q99727 224 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ANAPC13Q9BS18 74 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 MAP1LC3BQ9GZQ8 125 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 POLR2J3Q9H1A7 115 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 WDR13Q9H1Z4 485 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 PPDPFQ9H3Y8 114 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TBC1D17Q9HA65 648 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CALHM2Q9HA72 323 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM106BQ9NUM4 274 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 KCNIP1Q9NZI2 227 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 THYN1Q9P016 225 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 B4GALT7Q9UBV7 327 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 AJAP1Q9UKB5 411 aaPredicted RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 CYSLTR1Q9Y271 337 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 WSB1Q9Y6I7 421 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 DOCK6Q96HP0 2047 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF106Q9H2Y7 1883 aaKnown RBP5.68□□□□□ -1.5
CLCN3-203ENST00000502998 SPEGQ15772 3267 aa5.68□□□□□ -1.5
CLCN3-203ENST00000502998 ASXL3Q9C0F0 2248 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 DOCK8Q8NF50 2099 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 LOC100509620A0A075B734 347 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 A0A087WUU8 490 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 TNFSF12-TNFSF13A0A0A6YY99 330 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 CENPVL3A0A0U1RRI6 287 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 A0A1W2PQU0 124 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 hADV38S2A0JD32 116 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE12JA6NER3 117 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FTCDNL1E5RQL4 147 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 TAAR5O14804 337 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 HMGB3O15347 200 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PLPP2O43688 288 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 TIMM8AO60220 97 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE7O76087 117 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 C1RP00736 705 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE12FP0CL80 117 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE12GP0CL81 117 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE12IP0CL82 117 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FCGR2AP12318 317 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 CD33P20138 364 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 TNFRSF1BP20333 461 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 RPS4Y1P22090 263 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PRKACGP22612 351 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 HTR1DP28221 377 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FAUP35544 74 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PNPLA4P41247 253 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PTH2RP49190 550 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 CX3CR1P49238 355 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 VAMP7P51809 220 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 CNN1P51911 297 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 EFNA5P52803 228 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 ARG2P78540 354 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 HHEXQ03014 270 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 MZT1Q08AG7 82 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PNRC1Q12796 327 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 GAGE4Q13068 117 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms