RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 CAPSLQ8WWF8 208 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 SLAMF9Q96A28 289 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 RNF166Q96A37 237 aaPredicted RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 OPALINQ96PE5 141 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 IL4I1Q96RQ9 567 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 P2RX4Q99571 388 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 CHCHD6Q9BRQ6 235 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 THTPAQ9BU02 230 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 GON7Q9BXV9 100 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 GABARAPL3Q9BY60 117 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 NEK6Q9HC98 313 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 EXOSC4Q9NPD3 245 aaKnown RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 MOB4Q9Y3A3 225 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 AMMECR1Q9Y4X0 333 aaPredicted RBP4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 HSPE1-MOB4S4R3N1 261 aa4.85□□□□□ -1.63
LSM3P4-201ENST00000502948 LOC107986453A0A1B0GWG9 222 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ODAMA1E959 279 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 PSMB11A5LHX3 300 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 A6NIN4 97 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 J3QR06 171 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 TOR1AO14656 332 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 GYG2O15488 501 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 MMP23AO75900 390 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 LPLP06858 475 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 FCGR1AP12314 374 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 BCL3P20749 454 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 GABRR1P24046 479 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 CDK2P24941 298 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 EPHA2P29317 976 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 MTNR1BP49286 362 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 KRTAP10-11P60412 298 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 RPL23AP62750 156 aaKnown RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 SLC35B1P78383 322 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 EDDM3AQ14507 147 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ATP6AP1Q15904 470 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 C17orf58Q2M2W7 97 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 TMEM95Q3KNT9 176 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 PLA1AQ53H76 456 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 MEDAGQ5VYS4 303 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 Q6P435 159 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ETV3LQ6ZN32 361 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 CCDC121Q6ZUS5 278 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 SSX6Q7RTT6 188 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 FAM220AQ7Z4H9 259 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 TRAPPC6BQ86SZ2 158 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 SPATA24Q86W54 205 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ZDHHC13Q8IUH4 622 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 TPRX1Q8N7U7 411 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 PXT1Q8NFP0 134 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 OR52M1Q8NGK5 317 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 OR2G2Q8NGZ5 317 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 TRMT10AQ8TBZ6 339 aaKnown RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ADAT3Q96EY9 351 aaPredicted RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 CPNE2Q96FN4 548 aaPredicted RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 KIRREL1Q96J84 757 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 IFT22Q9H7X7 185 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 ZNF286AQ9HBT8 521 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 RBFOX1Q9NWB1 397 aaKnown RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 CHCHD3Q9NX63 227 aaKnown RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 GTF2A1LQ9UNN4 478 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 GMPPBQ9Y5P6 360 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 SIRT4Q9Y6E7 314 aaPredicted RBP4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 RYR3Q15413 4870 aa4.84□□□□□ -1.63
LSM3P4-201ENST00000502948 IGKV1-12A0A0C4DH73 117 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 A0A1W2PPI3 338 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 WI2-2373I1.2A0A1W2PRP0 233 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 SNTNA6NMZ2 147 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 SLC33A1O00400 549 aaPredicted RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 CCRL2O00421 344 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 MAGEB4O15481 346 aaPredicted RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 RPP14O95059 124 aaKnown RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 APOL3O95236 402 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 IGKV1D-12P01611 117 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 JUNBP17275 347 aaPredicted RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 PRKACAP17612 351 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 FASP25445 335 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 C21orf33P30042 268 aaPredicted RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 KIR3DL2P43630 455 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 GLIPR1P48060 266 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF85Q03923 595 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 CD69Q07108 199 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 AESQ08117 197 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 ZNF816Q0VGE8 651 aaPredicted RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 MADCAM1Q13477 382 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 IL13RA2Q14627 380 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 CDK5R1Q15078 307 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 KLHL22Q53GT1 634 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 NHLRC3Q5JS37 347 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 KRBOX4Q5JUW0 171 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 UNQ9370/PRO34162Q6UXP9 181 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 ASCL4Q6XD76 172 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 OR2W3Q7Z3T1 314 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 BCDIN3DQ7Z5W3 292 aaKnown RBP4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 TGIF2LXQ8IUE1 241 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 SERPINA12Q8IW75 414 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 FOXRED2Q8IWF2 684 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 IZUMO1Q8IYV9 350 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 SYS1Q8N2H4 156 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 PARP16Q8N5Y8 322 aa4.83□□□□□ -1.64
LSM3P4-201ENST00000502948 C5orf56Q8N8D9 126 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms