RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 ONECUT1Q9UBC0 465 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 SSR3Q9UNL2 185 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 V9GY05 133 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 MXRA5Q9NR99 2828 aa20.65■□□□□ 0.9
LSM6-202ENST00000502781 VSIG8P0DPA2 414 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 MGMTP16455 207 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 GADD45AP24522 165 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 MYL9P24844 172 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 CFPP27918 469 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 QRFPP83859 136 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 MEF2CQ06413 473 aaPredicted RBP20.64■□□□□ 0.89
LSM6-202ENST00000502781 MPV17LQ2QL34 196 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 CMTM4Q8IZR5 234 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 FAM185AQ8N0U4 392 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 PCGF1Q9BSM1 259 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 PPA2Q9H2U2 334 aa20.64■□□□□ 0.89
LSM6-202ENST00000502781 PDCD5O14737 125 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 IGHV4-38-2P0DP08 117 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 P2RX3P56373 397 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 EDDM3BP56851 147 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 PAX5Q02548 391 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 ZNF273Q14593 569 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 TAF9Q16594 264 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 TUSC1Q2TAM9 212 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 TCF23Q7RTU1 214 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 C11orf42Q8N5U0 333 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 YIPF6Q96EC8 236 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 Q96M66 194 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 CST11Q9H112 138 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 BANF2Q9H503 90 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 NUP50Q9UKX7 468 aa20.63■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A10PA6NDY2 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A18PA6NE21 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A16PA6NEW6 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A20PA6NIJ5 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A8PA6NJQ4 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A7PA6NKC0 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A22PA8MWA6 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A12PA8MX19 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A5PA8MXJ8 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A23PA8MXZ1 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 OR7C1O76099 320 aaPredicted RBP20.62■□□□□ 0.89
LSM6-202ENST00000502781 BPNT1O95861 308 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A15PP0C7V4 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A13PP0C7W8 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A14PP0C7W9 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 FAM90A24PP0C7X0 464 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 DLX6P56179 175 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 EDDM3AQ14507 147 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 TNFRSF14Q92956 283 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 COQ2Q96H96 371 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 PLGRKTQ9HBL7 147 aa20.62■□□□□ 0.89
LSM6-202ENST00000502781 RCC2Q9P258 522 aaKnown RBP20.62■□□□□ 0.89
LSM6-202ENST00000502781 TRAV40A0A0B4J280 105 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 TMEM14DPA8MWL7 114 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 CRTAPO75718 401 aaPredicted RBP20.61■□□□□ 0.89
LSM6-202ENST00000502781 EPHA1P21709 976 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 PAN3Q58A45 887 aaKnown RBP20.61■□□□□ 0.89
LSM6-202ENST00000502781 METAP1DQ6UB28 335 aaPredicted RBP20.61■□□□□ 0.89
LSM6-202ENST00000502781 VMO1Q7Z5L0 202 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 NR2C2APQ86WQ0 139 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 TPRX1Q8N7U7 411 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 KCNG3Q8TAE7 436 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 CHCHD6Q9BRQ6 235 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 METTL8Q9H825 291 aaKnown RBP20.61■□□□□ 0.89
LSM6-202ENST00000502781 LINC00312Q9Y6C7 94 aa20.61■□□□□ 0.89
LSM6-202ENST00000502781 A0A1W2PPH5 198 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 hADV38S2A0JD32 116 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 RAB3BP20337 219 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 KCNJ3P48549 501 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 OR10A3P58181 314 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 AESQ08117 197 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 UNC119Q13432 240 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 OR10K2Q6IF99 312 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 GDPGP1Q6ZNW5 385 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 PRIMA1Q86XR5 153 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 SUMF2Q8NBJ7 301 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 DPCDQ9BVM2 203 aaPredicted RBP20.6■□□□□ 0.89
LSM6-202ENST00000502781 SELENOIQ9C0D9 397 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 NCOR1P1Q9H4R4 102 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 DSCAML1Q8TD84 2053 aa20.6■□□□□ 0.89
LSM6-202ENST00000502781 CENPVL3A0A0U1RRI6 287 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 FUOMA2VDF0 154 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 CCL3L1P16619 93 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 PRTN3P24158 256 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 GLIPR1P48060 266 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 SCGB2A2Q13296 93 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 RAB11BQ15907 218 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 TIMM50Q3ZCQ8 353 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 C9orf139Q6ZV77 190 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 OR2W3Q7Z3T1 314 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 TPRA1Q86W33 373 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 FAM46BQ96A09 425 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 KCTD7Q96MP8 289 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 CENPOQ9BU64 300 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 FBLN5Q9UBX5 448 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 STEAP1Q9UHE8 339 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 IFITM5A6NNB3 132 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 C17orf98A8MV24 154 aa20.59■□□□□ 0.89
LSM6-202ENST00000502781 MPIG6BO95866 241 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms