RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 SHISA7A6NL88 538 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 B4DEV8 164 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 FAHP16930 419 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 PLA2G5P39877 138 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF695Q8IW36 515 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 ASCL3Q9NQ33 180 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 KIAA2026Q5HYC2 2103 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 OBSL1O75147 1896 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 TRBV24-1A0A075B6N3 115 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 SHISA8B8ZZ34 492 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 F5H5K5 113 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 GNRHRP30968 328 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 OR1D4P47884 311 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 HERV-K104P61576 105 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 ARMC6Q6NXE6 501 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 UEVLDQ8IX04 471 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 FLVCR1-AS1Q8TAF5 88 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 BAHD1Q8TBE0 780 aaPredicted RBP11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 RCC1LQ96I51 464 aaKnown RBP11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM106CQ9BVX2 250 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 FOXJ2Q9P0K8 574 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 VPS13AQ96RL7 3174 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 A0A0U1RQK1 487 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 C5orf63A6NC05 138 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 TLE3Q04726 772 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM267Q0VDI3 215 aaPredicted RBP11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 TDRG1Q3Y452 100 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 HLA-DQA1Q5Y7H0 255 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 VWCEQ96DN2 955 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 MSL2Q9HCI7 577 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 VAX2Q9UIW0 290 aa11.39□□□□□ -0.59
GAPVD1-220ENST00000497580 DOCK11Q5JSL3 2073 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 IGKV1-9A0A0C4DH69 117 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 B4DGG1 531 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 DDAH2O95865 285 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 BCL2P10415 239 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 PGCP20142 388 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 CD82P27701 267 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 OR10S1Q8NGN2 331 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 THAP3Q8WTV1 239 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 PGAM5Q96HS1 289 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 TP53RKQ96S44 253 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 PLEKHF2Q9H8W4 249 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SDF2L1Q9HCN8 221 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 A0A1W2PNV4 684 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 ADAM20O43506 726 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 LCATP04180 440 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 RND2P52198 227 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 CLDN17P56750 224 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 RPS21P63220 83 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM256Q8N2U0 113 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 NAT6Q93015 286 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 VSIRQ9H7M9 311 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 PATZ1Q9HBE1 687 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SOHLH2Q9NX45 425 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 MRPS18CQ9Y3D5 142 aaKnown RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 THSD7BQ9C0I4 1608 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 WDFY3Q8IZQ1 3526 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 TP53I11O14683 189 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 GALR2O43603 387 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SPRY1O43609 319 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 FOXL2P58012 376 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 FAM3BP58499 235 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 PNRC1Q12796 327 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 RAB35Q15286 201 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 C1orf194Q5T5A4 169 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SLC25A26Q70HW3 274 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SSX7Q7RTT5 188 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 GNPNAT1Q96EK6 184 aaPredicted RBP11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 CCDC74BQ96LY2 380 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 ANAPC10Q9UM13 185 aa11.38□□□□□ -0.59
GAPVD1-220ENST00000497580 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 IFNA5P01569 189 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 S100A7P31151 101 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 CHRNA7P36544 502 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF92Q03936 586 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 RUNX3Q13761 415 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 CCNL2Q96S94 520 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PLK3Q9H4B4 646 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 NECAP2Q9NVZ3 263 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 P4HTMQ9NXG6 502 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 TRAV34A0A0B4J273 112 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PROB1E7EW31 1015 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PITX3O75364 302 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 APODP05090 189 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 CELA2BP08218 269 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 ARL6IP1Q15041 203 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 FBXO46Q6PJ61 603 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF573Q86YE8 665 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 SPPL3Q8TCT6 385 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 ELSPBP1Q96BH3 223 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PRSS50Q9UI38 385 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 TBX21Q9UL17 535 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PLRG1O43660 514 aaKnown RBP11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 MT-ATP6P00846 226 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 BMP5P22003 454 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 PLCXD2Q0VAA5 305 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 FNDC7Q5VTL7 733 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms