RNA–Protein interactions for RNA: ENST00000497564.5

VPS26A-209, Transcript of VPS26, retromer complex component A, humanhuman

TSL 5

Gene VPS26A, Length 462 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-209ENST00000497564 PPP1R3CQ9UQK1 317 aa11.92□□□□□ -0.5
VPS26A-209ENST00000497564 WNT9BO14905 357 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 CD8AP01732 235 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 CSF1P09603 554 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 EGR1P18146 543 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 NAT1P18440 290 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 LMO1P25800 156 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 RCVRNP35243 200 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 ARFRP1Q13795 201 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 NKAPLQ5M9Q1 402 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 SHEQ5VZ18 495 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 TRAPPC6BQ86SZ2 158 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 ZCCHC24Q8N2G6 241 aaKnown RBP11.91□□□□□ -0.5
VPS26A-209ENST00000497564 TRAF4Q9BUZ4 470 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-209ENST00000497564 C11orf54Q9H0W9 315 aaPredicted RBP11.91□□□□□ -0.5
VPS26A-209ENST00000497564 WDR13Q9H1Z4 485 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 GLS2Q9UI32 602 aa11.91□□□□□ -0.5
VPS26A-209ENST00000497564 NIPBLQ6KC79 2804 aaeCLIP11.91□□□□□ -0.5
VPS26A-209ENST00000497564 DOCK11Q5JSL3 2073 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 TRAV24A0A0B4J272 114 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 LRRC30A6NM36 301 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 SH2D1BO14796 132 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 DEGS1O15121 323 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 LYRM1O43325 122 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 DTYMKP23919 212 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 SNU13P55769 128 aaKnown RBP11.9□□□□□ -0.5
VPS26A-209ENST00000497564 RBM39Q14498 530 aaKnown RBP11.9□□□□□ -0.5
VPS26A-209ENST00000497564 OXA1LQ15070 435 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 ATAD3CQ5T2N8 411 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 TMEM229BQ8NBD8 167 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 WFDC11Q8NEX6 87 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 IGFBPL1Q8WX77 278 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 COX4I2Q96KJ9 171 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 FAAP24Q9BTP7 215 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 CHST6Q9GZX3 395 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 TREM2Q9NZC2 230 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 AK3Q9UIJ7 227 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 CACNG2Q9Y698 323 aa11.9□□□□□ -0.5
VPS26A-209ENST00000497564 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 MEIS3P1A6NDR6 274 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 NAP1L6A6NFF2 107 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 POM121CA8CG34 1229 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 CENPXA8MT69 81 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 MCRIP1C9JLW8 97 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 SLC33A1O00400 549 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-209ENST00000497564 OR2H2O95918 312 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 HAND1O96004 215 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 SOD3P08294 240 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 IRF2P14316 349 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 DUSP1P28562 367 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 MDH2P40926 338 aaKnown RBP11.89□□□□□ -0.51
VPS26A-209ENST00000497564 TAS2R19P59542 299 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 PDCD1Q15116 288 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 TEX36Q5VZQ5 186 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 MZT2BQ6NZ67 158 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 C1orf87Q8N0U7 546 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 CYYR1Q96J86 154 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 CCL19Q99731 98 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 CMSS1Q9BQ75 279 aaKnown RBP11.89□□□□□ -0.51
VPS26A-209ENST00000497564 DPCDQ9BVM2 203 aaPredicted RBP11.89□□□□□ -0.51
VPS26A-209ENST00000497564 RAB1BQ9H0U4 201 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 IFT46Q9NQC8 304 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 NLKQ9UBE8 527 aa11.89□□□□□ -0.51
VPS26A-209ENST00000497564 TLN2Q9Y4G6 2542 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 C2CD3Q4AC94 2353 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 TRBV6-6A0A0A6YYG2 114 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 C3orf80F5H4A9 247 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 NAPSAO96009 420 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 CD74P04233 296 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 PSG2P11465 335 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 ZNF44P15621 663 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 MUC1P15941 1255 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-209ENST00000497564 TBPP20226 339 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 RFX2P48378 723 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 KCNJ3P48549 501 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 GMFBP60983 142 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 SRSF7Q16629 238 aaKnown RBP eCLIP11.88□□□□□ -0.51
VPS26A-209ENST00000497564 HOGA1Q86XE5 327 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 TGIF2LYQ8IUE0 185 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 GAPTQ8N292 157 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 NEU4Q8WWR8 484 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-209ENST00000497564 TMUB1Q9BVT8 246 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 RIMS4Q9H426 269 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-209ENST00000497564 HRASLSQ9HDD0 168 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 C12orf4Q9NQ89 552 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 BEX4Q9NWD9 120 aaPredicted RBP11.88□□□□□ -0.51
VPS26A-209ENST00000497564 DNAJB11Q9UBS4 358 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 ZNF222Q9UK12 451 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 EDARQ9UNE0 448 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 WIPI2Q9Y4P8 454 aa11.88□□□□□ -0.51
VPS26A-209ENST00000497564 IGKV1D-17A0A075B6S4 117 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 LINC00854A0A1B0GVQ3 168 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 UBE2QL1A1L167 161 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 RFPL4AA6NLU0 287 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 OR2AT4A6NND4 320 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 RFPL4AL1F8VTS6 287 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 TMEM178BH3BS89 294 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 SIRPB1O00241 398 aa11.87□□□□□ -0.51
VPS26A-209ENST00000497564 FSTL3O95633 263 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms