RNA–Protein interactions for RNA: ENST00000497327.1

GGPS1-208, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 3

Gene GGPS1, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-208ENST00000497327 RNASE6Q93091 150 aaKnown RBP4.5□□□□□ -1.69
GGPS1-208ENST00000497327 YIPF5Q969M3 257 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 RFT1Q96AA3 541 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 BORCS8Q96FH0 119 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 WFIKKN1Q96NZ8 548 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 PAPOLGQ9BWT3 736 aaKnown RBP4.5□□□□□ -1.69
GGPS1-208ENST00000497327 TM2D1Q9BX74 207 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 OR51B6Q9H340 312 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 OR51I2Q9H344 312 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 AUNIPQ9H7T9 357 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 NEK6Q9HC98 313 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 ABCB10Q9NRK6 738 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 IL36GQ9NZH8 169 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 ERRFI1Q9UJM3 462 aaPredicted RBP4.5□□□□□ -1.69
GGPS1-208ENST00000497327 PURGQ9UJV8 347 aaKnown RBP4.5□□□□□ -1.69
GGPS1-208ENST00000497327 SLC7A11Q9UPY5 501 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 KCNK7Q9Y2U2 307 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 RBMX2Q9Y388 322 aaKnown RBP4.5□□□□□ -1.69
GGPS1-208ENST00000497327 BSNQ9UPA5 3926 aa4.5□□□□□ -1.69
GGPS1-208ENST00000497327 ZFYVE26Q68DK2 2539 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 HIVEP3Q5T1R4 2406 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 TRAV18A0A075B6X5 111 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 A0A1B0GUH1 482 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 FAM230AA0A1W2PPH8 454 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 NKX2-6A6NCS4 301 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 OR5B21A6NL26 309 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CYSRT1A8MQ03 144 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ZNF732B4DXR9 585 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 GABARAPH6UMI1 98 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 TNFRSF13BO14836 293 aaPredicted RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MLNRO43193 412 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 AKR7A2O43488 359 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SPRY1O43609 319 aaPredicted RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ANGPTL7O43827 346 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 PTBP3O95758 552 aaKnown RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 IGHV3-13P01766 116 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CRYAAP02489 173 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SFTPBP07988 381 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 PTHLHP12272 177 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 AGAP20933 346 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 GNLYP22749 145 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CA6P23280 308 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 PTAFRP25105 342 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 LOXP28300 417 aaPredicted RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SERPINF1P36955 418 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 UQCRFS1P47985 274 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 RFX2P48378 723 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 FABP6P51161 128 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ERVK11-1P61568 191 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MRPS10P82664 201 aaKnown RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SORDQ00796 357 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 IGFBP7Q16270 282 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 RGS21Q2M5E4 152 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ZNF718Q3SXZ3 478 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 NHLRC3Q5JS37 347 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 TMEM69Q5SWH9 247 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 NCMAPQ5T1S8 102 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 HACD4Q5VWC8 232 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 PLCXD3Q63HM9 321 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ELP2Q6IA86 826 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 RAB12Q6IQ22 244 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MTFR2Q6P444 385 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ACSM6Q6P461 480 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 GDPD3Q7L5L3 318 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 RTN4RL2Q86UN3 420 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 LRP11Q86VZ4 500 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 C11orf53Q8IXP5 236 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SAXO1Q8IYX7 474 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 OR8H2Q8N162 312 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 FBXL14Q8N1E6 418 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CENPSQ8N2Z9 138 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 FTMTQ8N4E7 242 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 OR10K1Q8NGX5 313 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 OR10R2Q8NGX6 335 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SETD6Q8TBK2 473 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 GPX8Q8TED1 209 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 C15orf40Q8WUR7 153 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SMIM4Q8WVI0 70 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 FAM46BQ96A09 425 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SEH1LQ96EE3 360 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CPNE2Q96FN4 548 aaPredicted RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CYYR1Q96J86 154 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 RNF170Q96K19 258 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 NICN1Q9BSH3 213 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 PKIBQ9C010 78 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 SLC22A4Q9H015 551 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 CST11Q9H112 138 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 METTL9Q9H1A3 318 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 TLNRD1Q9H1K6 362 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ATG5Q9H1Y0 275 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 BANF2Q9H503 90 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 AAMDCQ9H7C9 122 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 DIABLOQ9NR28 239 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 COQ3Q9NZJ6 369 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MTCH1Q9NZJ7 389 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MYEF2Q9P2K5 600 aaKnown RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 ING4Q9UNL4 249 aa4.49□□□□□ -1.69
GGPS1-208ENST00000497327 MRPS7Q9Y2R9 242 aaKnown RBP4.49□□□□□ -1.69
GGPS1-208ENST00000497327 NOP16Q9Y3C1 178 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms