RNA–Protein interactions for RNA: ENST00000497311.5

SMC4-226, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-226ENST00000497311 RHOFQ9HBH0 211 aa13.75□□□□□ -0.21
SMC4-226ENST00000497311 EXOGQ9Y2C4 368 aaKnown RBP13.75□□□□□ -0.21
SMC4-226ENST00000497311 OR4C45A6NMZ5 311 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 ADARB2-AS1A8MUL3 147 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 GLIPR1P48060 266 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 ARHGDIBP52566 201 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 BAIAP2L2Q6UXY1 529 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 RNF144BQ7Z419 303 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 SAXO1Q8IYX7 474 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 OR5AU1Q8NGC0 362 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 ZCCHC4Q9H5U6 513 aa13.74□□□□□ -0.21
SMC4-226ENST00000497311 FAM172BPA6NC97 362 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 LEUTXA8MZ59 168 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 CSN2P05814 226 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 CD24P25063 80 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 ZSCAN26Q16670 478 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 KRBOX4Q5JUW0 171 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 CHST4Q8NCG5 386 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 OR4D6Q8NGJ1 314 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 CREB3L1Q96BA8 519 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 LGALS12Q96DT0 336 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 LIN7BQ9HAP6 207 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 ING3Q9NXR8 418 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 DNAH3Q8TD57 4116 aa13.73□□□□□ -0.21
SMC4-226ENST00000497311 ODAMA1E959 279 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 TOR1AO14656 332 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 DEGS1O15121 323 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 IGLV1-47P01700 117 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 HCKP08631 526 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 RPSAP08865 295 aaKnown RBP13.72□□□□□ -0.21
SMC4-226ENST00000497311 TMEM225BP0DP42 221 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 CD34P28906 385 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 CEACAM3P40198 252 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 PTGFRP43088 359 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 CD83Q01151 205 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 GALEQ14376 348 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 Q6P435 159 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 Q6ZPA2 131 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 CENPVQ7Z7K6 275 aaPredicted RBP13.72□□□□□ -0.21
SMC4-226ENST00000497311 LHFPL3Q86UP9 236 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 SERPINA12Q8IW75 414 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 OR5D14Q8NGL3 314 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 SGCDQ92629 289 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 SLC25A33Q9BSK2 321 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 ALG8Q9BVK2 526 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 ZNF286AQ9HBT8 521 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 AASSQ9UDR5 926 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 MYRFQ9Y2G1 1151 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 GMPPBQ9Y5P6 360 aa13.72□□□□□ -0.21
SMC4-226ENST00000497311 SLC33A1O00400 549 aaPredicted RBP13.71□□□□□ -0.21
SMC4-226ENST00000497311 PIN1P1O15428 100 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 SULT1B1O43704 296 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 ALX3O95076 343 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 DBTP11182 482 aaKnown RBP13.71□□□□□ -0.21
SMC4-226ENST00000497311 GDNFP39905 211 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 PRRX1P54821 245 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 ATXN7L3Q14CW9 347 aaPredicted RBP13.71□□□□□ -0.21
SMC4-226ENST00000497311 KISS1Q15726 138 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 SYS1Q8N2H4 156 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 MRAPQ8TCY5 172 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 COQ2Q96H96 371 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 NECAP2Q9NVZ3 263 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 OR6C3Q9NZP0 311 aa13.71□□□□□ -0.21
SMC4-226ENST00000497311 A0A1W2PRX2 142 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 TMEM212A6NML5 194 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 ZNF729A6NN14 1252 aaPredicted RBP13.7□□□□□ -0.22
SMC4-226ENST00000497311 BUB1B-PAK6H3BSN5 160 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 OR2F2O95006 317 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 LPLP06858 475 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 CD33P20138 364 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 ZP1P60852 638 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 GABPB1Q06547 395 aaPredicted RBP13.7□□□□□ -0.22
SMC4-226ENST00000497311 MRPL28Q13084 256 aaKnown RBP13.7□□□□□ -0.22
SMC4-226ENST00000497311 CDK5R1Q15078 307 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 ABCA11PQ4W5N1 156 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 TPTE2P1Q5T6R2 138 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 PARP16Q8N5Y8 322 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 Q96MT0 163 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 RDH12Q96NR8 316 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 RBM14Q96PK6 669 aaKnown RBP13.7□□□□□ -0.22
SMC4-226ENST00000497311 ISG20L2Q9H9L3 353 aaKnown RBP13.7□□□□□ -0.22
SMC4-226ENST00000497311 FAM118AQ9NWS6 357 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 DHDHQ9UQ10 334 aa13.7□□□□□ -0.22
SMC4-226ENST00000497311 A0A087X0M5 115 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 LOC100130705A0A1B0GUX0 176 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 A0A1B0GX30 115 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 MPZL2O60487 215 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 ZFPL1O95159 310 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 FADS2O95864 444 aaKnown RBP13.69□□□□□ -0.22
SMC4-226ENST00000497311 CCDC159P0C7I6 412 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 PF4V1P10720 104 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 GABRB1P18505 474 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 MNDAP41218 407 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 MTNR1BP49286 362 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 RBM39Q14498 530 aaKnown RBP13.69□□□□□ -0.22
SMC4-226ENST00000497311 RCN1Q15293 331 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 C17orf58Q2M2W7 97 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 ZNF691Q5VV52 312 aa13.69□□□□□ -0.22
SMC4-226ENST00000497311 CCDC144NLQ6NUI1 221 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms