RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 SOX8P57073 446 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 TGIF1Q15583 401 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 IGSF11Q5DX21 431 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ATP1A1-AS1Q5TC04 95 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 Q6ZPA2 131 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 GLYATL2Q8WU03 294 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 OR5P3Q8WZ94 311 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 MSI2Q96DH6 328 aaKnown RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 SAT2Q96F10 170 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ZDHHC11Q9H8X9 412 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 CRIM1Q9NZV1 1036 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 LPAR3Q9UBY5 353 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF629Q9UEG4 869 aaPredicted RBP9.5□□□□□ -0.89
CMSS1-208ENST00000496116 TMED3Q9Y3Q3 217 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF175Q9Y473 711 aa9.5□□□□□ -0.89
CMSS1-208ENST00000496116 H7C1Q1 480 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 J3QW42 95 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 ZNHIT1O43257 154 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 FAM157CP0CG43 387 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 GNG3P63215 75 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 DEFA5Q01523 94 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 TBC1D28Q2M2D7 210 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 PXDC1Q5TGL8 231 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 RPL7L1Q6DKI1 246 aaKnown RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 OR2A2Q6IF42 318 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 HAGHLQ6PII5 290 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 IL34Q6ZMJ4 242 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 P4HA3Q7Z4N8 544 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 LYZL2Q7Z4W2 148 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF565Q8N9K5 539 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 BOLLQ8N9W6 283 aaKnown RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 GTF3AQ92664 365 aaKnown RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 BCL2L2Q92843 193 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 LRRC46Q96FV0 321 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 GMPPAQ96IJ6 420 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 MS4A7Q9GZW8 240 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 MMP26Q9NRE1 261 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 SPRR3Q9UBC9 169 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 C3orf85A0A1B0GTC6 90 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 PCNX2A6NKB5 2137 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 MPPED1O15442 326 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 MBPP02686 304 aaPredicted RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 PRKACAP17612 351 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 WNT5AP41221 380 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 SPEM2Q0P670 501 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 MRPL49Q13405 166 aaKnown RBP9.49□□□□□ -0.89
CMSS1-208ENST00000496116 FBXW12Q6X9E4 464 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 OR11L1Q8NGX0 322 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 GLRX2Q9NS18 164 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 FBXL17Q9UF56 701 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 ATP23Q9Y6H3 246 aa9.49□□□□□ -0.89
CMSS1-208ENST00000496116 TMEM218A2RU14 115 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 TRDCB7Z8K6 153 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 SYNGR1O43759 233 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 TNFSF10P50591 281 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 TMEM33P57088 247 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 TGFBR3Q03167 851 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 IL24Q13007 206 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 IL13RA2Q14627 380 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 SPIN3Q5JUX0 258 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 MDP1Q86V88 176 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 LHFPL5Q8TAF8 219 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 SMIM8Q96KF7 97 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 PKIBQ9C010 78 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 RHOFQ9HBH0 211 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 SHANK1Q9Y566 2161 aa9.48□□□□□ -0.89
CMSS1-208ENST00000496116 GPR31O00270 319 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 HSPB6O14558 160 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 ST8SIA3O43173 380 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GLAP06280 429 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SCTP09683 121 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GLI4P10075 376 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GNRHRP30968 328 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 RND3P61587 244 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 BLOC1S1P78537 153 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 RNFT1Q5M7Z0 435 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GPR157Q5UAW9 335 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 MEX3BQ6ZN04 569 aaKnown RBP9.47□□□□□ -0.89
CMSS1-208ENST00000496116 FAM58AQ8N1B3 248 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SLC35G3Q8N808 338 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SUMF2Q8NBJ7 301 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 HS3ST6Q96QI5 342 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TP53RKQ96S44 253 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TMEM222Q9H0R3 208 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 OR51B6Q9H340 312 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 IL36RNQ9UBH0 155 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 LHX6Q9UPM6 363 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 AMDHD2Q9Y303 409 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GPR137BO60478 399 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 ATG12O94817 140 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 CDS2O95674 445 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 IL32P24001 234 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 P2RY1P47900 373 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 SULT1A2P50226 295 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 UBE2NP61088 152 aaKnown RBP9.47□□□□□ -0.89
CMSS1-208ENST00000496116 PJVKQ0ZLH3 352 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 ZNF273Q14593 569 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 GNMTQ14749 295 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 TMEM268Q5VZI3 342 aa9.47□□□□□ -0.89
CMSS1-208ENST00000496116 OR2T2Q6IF00 324 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms