RNA–Protein interactions for RNA: ENST00000494938.2

SCAP-213, Transcript of SREBF chaperone, humanhuman

TSL 4

Gene SCAP, Length 579 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-213ENST00000494938 LDLRAD3Q86YD5 345 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 MS4A15Q8N5U1 240 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 TMEM86BQ8N661 226 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 CHST4Q8NCG5 386 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 PPP1R35Q8TAP8 253 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 TAF15Q92804 592 aaKnown RBP eCLIP11.71□□□□□ -0.53
SCAP-213ENST00000494938 CORO2AQ92828 525 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.53
SCAP-213ENST00000494938 METTL9Q9H1A3 318 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 PPIL3Q9H2H8 161 aaKnown RBP11.71□□□□□ -0.53
SCAP-213ENST00000494938 TNFRSF19Q9NS68 423 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 IL36GQ9NZH8 169 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 ZNF581Q9P0T4 197 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 CKLFQ9UBR5 152 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 FAM96BQ9Y3D0 163 aa11.71□□□□□ -0.53
SCAP-213ENST00000494938 hCG_1809904A0A1W2PP81 198 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 A0A1W2PPE2 198 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 A0A1W2PR64 198 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 A0A1W2PRV1 198 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 HTR3BO95264 441 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 IGHV4-59P01825 116 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 RBP4P02753 201 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 ZNF44P15621 663 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 GLIPR1P48060 266 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 ACTG1P63261 375 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 AESQ08117 197 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 TPBGQ13641 420 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 IL13RA2Q14627 380 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 PIGYQ3MUY2 71 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 MIDNQ504T8 468 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 FAM27D1Q5T7N8 215 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 CDH26Q8IXH8 852 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 COQ2Q96H96 371 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 TMED9Q9BVK6 235 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 CHIAQ9BZP6 476 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 FAM192AQ9GZU8 254 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 ISYNA1Q9NPH2 558 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 LINC00312Q9Y6C7 94 aa11.7□□□□□ -0.54
SCAP-213ENST00000494938 DENRO43583 198 aaKnown RBP11.69□□□□□ -0.54
SCAP-213ENST00000494938 SC5DO75845 299 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 MMP23AO75900 390 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 MAS1P04201 325 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 CSN2P05814 226 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 IGHV1-8P0DP01 117 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 NHLRC3Q5JS37 347 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 LIPKQ5VXJ0 399 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 ZNF782Q6ZMW2 699 aaPredicted RBP11.69□□□□□ -0.54
SCAP-213ENST00000494938 TMEM91Q6ZNR0 172 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 LRRTM1Q86UE6 522 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 OSR2Q8N2R0 312 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 SSMEM1Q8WWF3 244 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 ZNF714Q96N38 554 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 CCDC90BQ9GZT6 254 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 PPA2Q9H2U2 334 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 UBE2J1Q9Y385 318 aaPredicted RBP11.69□□□□□ -0.54
SCAP-213ENST00000494938 POMT1Q9Y6A1 747 aa11.69□□□□□ -0.54
SCAP-213ENST00000494938 A0A1W2PP11 408 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 ODAMA1E959 279 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 FAM181BA6NEQ2 426 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 FAM90A8PA6NJQ4 464 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 FBP1P09467 338 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 CGB3P0DN86 165 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 CGB7P0DN87 165 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 CD37P11049 281 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 COX7A1P24310 79 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 C12orf54Q6X4T0 127 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 CEACAM19Q7Z692 300 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 BEND2Q8NDZ0 799 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 OR11H6Q8NGC7 330 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 OR4D6Q8NGJ1 314 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 UFD1Q92890 307 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 TMEM203Q969S6 136 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 MUL1Q969V5 352 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 MEGF9Q9H1U4 602 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 IFT22Q9H7X7 185 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 ZNRD1Q9P1U0 126 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 ST3GAL6Q9Y274 331 aa11.68□□□□□ -0.54
SCAP-213ENST00000494938 RRP15Q9Y3B9 282 aaKnown RBP11.68□□□□□ -0.54
SCAP-213ENST00000494938 FUOMA2VDF0 154 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 MEGF11A6BM72 1044 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 GEMIN2O14893 280 aaKnown RBP11.67□□□□□ -0.54
SCAP-213ENST00000494938 ZNF780AO75290 641 aaPredicted RBP11.67□□□□□ -0.54
SCAP-213ENST00000494938 UCHL1P09936 223 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 HSMCR30P0CW71 290 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 CPEP16870 476 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 PAX6P26367 422 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 MAPK3P27361 379 aaPredicted RBP11.67□□□□□ -0.54
SCAP-213ENST00000494938 RBM11P57052 281 aaKnown RBP11.67□□□□□ -0.54
SCAP-213ENST00000494938 MLLT11Q13015 90 aaPredicted RBP11.67□□□□□ -0.54
SCAP-213ENST00000494938 TAF9Q16594 264 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 SLC22A6Q4U2R8 563 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 AWAT1Q58HT5 328 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 KRBOX4Q5JUW0 171 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 LDLRAD2Q5SZI1 272 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 GLIPR1L1Q6UWM5 242 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 BAIAP2L2Q6UXY1 529 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 JAGN1Q8N5M9 183 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 OR13D1Q8NGV5 346 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 THRSPQ92748 146 aa11.67□□□□□ -0.54
SCAP-213ENST00000494938 MGLLQ99685 303 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms