RNA–Protein interactions for RNA: ENST00000494776.1

LIME1-209, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

TSL 5

Gene LIME1, Length 391 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-209ENST00000494776 GPR176Q14439 515 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 IL13RA2Q14627 380 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 INSL4Q14641 139 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 TUSC1Q2TAM9 212 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 SLC22A6Q4U2R8 563 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 Q6P435 159 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 CEACAM19Q7Z692 300 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 CDH26Q8IXH8 852 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 OSR2Q8N2R0 312 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 NKAIN3Q8N8D7 197 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 TNFRSF14Q92956 283 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 MUL1Q969V5 352 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 ZNF714Q96N38 554 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 MGLLQ99685 303 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 UNKLQ9H9P5 680 aaKnown RBP13.05□□□□□ -0.32
LIME1-209ENST00000494776 TNFRSF19Q9NS68 423 aa13.05□□□□□ -0.32
LIME1-209ENST00000494776 MRPS28Q9Y2Q9 187 aaKnown RBP13.05□□□□□ -0.32
LIME1-209ENST00000494776 MEIOCA2RUB1 952 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 MEGF11A6BM72 1044 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 SLC33A1O00400 549 aaPredicted RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 HOXA3O43365 443 aaPredicted RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 PAHP00439 452 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 ERP29P30040 261 aaKnown RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 P2RX3P56373 397 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 GABARAPL2P60520 117 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 TPBGQ13641 420 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 SLC9A3R2Q15599 337 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 TRAM1Q15629 374 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 TBCEQ15813 527 aaPredicted RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 PIGYQ3MUY2 71 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 HSD17B12Q53GQ0 312 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 PAN3Q58A45 887 aaKnown RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 AWAT2Q6E213 333 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 GLIPR1L1Q6UWM5 242 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 UNQ9370/PRO34162Q6UXP9 181 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 ZNF782Q6ZMW2 699 aaPredicted RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 PNKDQ8N490 385 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 PIP4P2Q8N4L2 257 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 OR51T1Q8NGJ9 327 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 GCDHQ92947 438 aaPredicted RBP13.04□□□□□ -0.32
LIME1-209ENST00000494776 SLITRK2Q9H156 845 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 IL36GQ9NZH8 169 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 ST3GAL6Q9Y274 331 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 LINC00312Q9Y6C7 94 aa13.04□□□□□ -0.32
LIME1-209ENST00000494776 TRGV10A0A0A0MS01 117 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 FBP1P09467 338 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 GTF2F2P13984 249 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 CPEP16870 476 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 COX7A1P24310 79 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 PSMA1P25786 263 aaKnown RBP13.03□□□□□ -0.32
LIME1-209ENST00000494776 AESQ08117 197 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 ATXN7L3Q14CW9 347 aaPredicted RBP13.03□□□□□ -0.32
LIME1-209ENST00000494776 KRBOX4Q5JUW0 171 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 FAM27D1Q5T7N8 215 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 Q6YL49 198 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 ZNF367Q7RTV3 350 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 SVOPQ8N4V2 548 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 PRDM13Q9H4Q3 707 aa13.03□□□□□ -0.32
LIME1-209ENST00000494776 C17orf98A8MV24 154 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 CLDN34H7C241 214 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 MRPS14O60783 128 aaKnown RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 OR7C1O76099 320 aaPredicted RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 RBP4P02753 201 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 CSN2P05814 226 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 MELTFP08582 738 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 SRMP19623 302 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 SAA4P35542 130 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 GLIPR1P48060 266 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 DLX6P56179 175 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 LGALS4P56470 323 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 RBM11P57052 281 aaKnown RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 RPS25P62851 125 aaKnown RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 GLT8D1Q68CQ7 371 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 C11orf42Q8N5U0 333 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 Q8NFD4 153 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 OR13D1Q8NGV5 346 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 SSMEM1Q8WWF3 244 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 PHYHIPQ92561 330 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 FOXRED1Q96CU9 486 aaPredicted RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 C1orf147Q96MC9 270 aaPredicted RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 UQCC2Q9BRT2 126 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 YTHDF1Q9BYJ9 559 aaKnown RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 ACOT13Q9NPJ3 140 aa13.02□□□□□ -0.33
LIME1-209ENST00000494776 UBE2J1Q9Y385 318 aaPredicted RBP13.02□□□□□ -0.33
LIME1-209ENST00000494776 TRAV24A0A0B4J272 114 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 GEMIN2O14893 280 aaKnown RBP13.01□□□□□ -0.33
LIME1-209ENST00000494776 RNASE1P07998 156 aaKnown RBP13.01□□□□□ -0.33
LIME1-209ENST00000494776 IGHV1-8P0DP01 117 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 EMX1Q04741 257 aaPredicted RBP13.01□□□□□ -0.33
LIME1-209ENST00000494776 MIDNQ504T8 468 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 ATAD3CQ5T2N8 411 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 HCP5Q6MZN7 132 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 TCF23Q7RTU1 214 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 LINC00596Q86U02 117 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 OR4D6Q8NGJ1 314 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 BARHL1Q9BZE3 327 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 DPAGT1Q9H3H5 408 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 GAL3ST2Q9H3Q3 398 aa13.01□□□□□ -0.33
LIME1-209ENST00000494776 A0A1W2PP11 408 aa13□□□□□ -0.33
LIME1-209ENST00000494776 ODAMA1E959 279 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms