RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 AMY1AP04745 511 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 AMY2AP04746 511 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 LIMS3P0CW19 117 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 LIMS4P0CW20 117 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 ZNF44P15621 663 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 LMO1P25800 156 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 KISS1Q15726 138 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 SMN1Q16637 294 aaKnown RBP9.31□□□□□ -0.92
VTI1A-208ENST00000494728 ZSCAN26Q16670 478 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 OXLD1Q5BKU9 147 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 TCTEX1D4Q5JR98 221 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 ZNF529Q6P280 563 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 C10orf99Q6UWK7 81 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 HEPN1Q6WQI6 88 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 SYS1Q8N2H4 156 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 ABHD12Q8N2K0 398 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 OR52I1Q8NGK6 324 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 OR10K1Q8NGX5 313 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 RHOXF1Q8NHV9 184 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 PRSS22Q9GZN4 317 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 ZCCHC4Q9H5U6 513 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
VTI1A-208ENST00000494728 TRGV10A0A0A0MS01 117 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 TRAV24A0A0B4J272 114 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 SH2D1BO14796 132 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 SULT1B1O43704 296 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 WBP4O75554 376 aaKnown RBP9.3□□□□□ -0.92
VTI1A-208ENST00000494728 IGHV3-7P01780 117 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 CSN2P05814 226 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 HCKP08631 526 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 HTR1DP28221 377 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 CD34P28906 385 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 VDAC2P45880 294 aaPredicted RBP9.3□□□□□ -0.92
VTI1A-208ENST00000494728 BDH1Q02338 343 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 SCN1BQ07699 218 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 KRBOX4Q5JUW0 171 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 ZFP1Q6P2D0 407 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 Q6ZPA2 131 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 SAXO1Q8IYX7 474 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 PARP16Q8N5Y8 322 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 OR13A1Q8NGR1 328 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 PLPPR1Q8TBJ4 325 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 CORO2AQ92828 525 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 ORAI1Q96D31 301 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 CYYR1Q96J86 154 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 GAL3ST2Q9H3Q3 398 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 TAS2R4Q9NYW5 299 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 PLA2G2EQ9NZK7 142 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 PITPNC1Q9UKF7 332 aa9.3□□□□□ -0.92
VTI1A-208ENST00000494728 KMT2CQ8NEZ4 4911 aaKnown RBP9.3□□□□□ -0.92
VTI1A-208ENST00000494728 TENM3Q9P273 2699 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 LOC100130705A0A1B0GUX0 176 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 A0A1W2PRX2 142 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 H0YJX3 145 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 LY6LH3BQJ8 138 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 LALBAP00709 142 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 OCM2P0CE71 109 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 OCMP0CE72 109 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-208ENST00000494728 CGB3P0DN86 165 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 CGB7P0DN87 165 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 PTGFRP43088 359 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 SOX2P48431 317 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 RAB40BQ12829 278 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 DIAPH2-AS1Q14236 149 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 HLA-DRB5Q30154 266 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 PIGYQ3MUY2 71 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 TPTE2P1Q5T6R2 138 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 ZNF691Q5VV52 312 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 OR51T1Q8NGJ9 327 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 OR13C5Q8NGS8 318 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 OR5AK2Q8NH90 309 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 TSEN15Q8WW01 171 aaKnown RBP9.29□□□□□ -0.92
VTI1A-208ENST00000494728 LEAP2Q969E1 77 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 R3HDM4Q96D70 268 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 KIRREL1Q96J84 757 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 SLC25A33Q9BSK2 321 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 S100A14Q9HCY8 104 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 FAM118AQ9NWS6 357 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 TAS2R3Q9NYW6 316 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 DPM3Q9P2X0 92 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 KIF25Q9UIL4 384 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 DHDHQ9UQ10 334 aa9.29□□□□□ -0.92
VTI1A-208ENST00000494728 SIRT4Q9Y6E7 314 aaPredicted RBP9.29□□□□□ -0.92
VTI1A-208ENST00000494728 A0A087X0M5 115 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 TRAV39A0A0B4J263 110 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 A0A1B0GX30 115 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 MAGEA13PA6NCF6 341 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 TMEM212A6NML5 194 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 BUB1B-PAK6H3BSN5 160 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 ALX3O95076 343 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 CLIC3O95833 236 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 FADS2O95864 444 aaKnown RBP9.28□□□□□ -0.92
VTI1A-208ENST00000494728 TMEM225BP0DP42 221 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 GLP1RP43220 463 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 OR3A4PP47883 348 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 ETV1P50549 477 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 CD83Q01151 205 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 DOC2BQ14184 412 aa9.28□□□□□ -0.92
VTI1A-208ENST00000494728 ABCA11PQ4W5N1 156 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms