RNA–Protein interactions for RNA: ENST00000494518.1

SKA1-205, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

TSL 2

Gene SKA1, Length 746 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-205ENST00000494518 SH2D1BO14796 132 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 IGLV1-47P01700 117 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 CCDC159P0C7I6 412 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 VSIG8P0DPA2 414 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 PRKACBP22694 351 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 ERP29P30040 261 aaKnown RBP10.05□□□□□ -0.8
SKA1-205ENST00000494518 PTGFRP43088 359 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 NANOS3P60323 173 aaKnown RBP10.05□□□□□ -0.8
SKA1-205ENST00000494518 HLA-DRB5Q30154 266 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 KRBOX4Q5JUW0 171 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 SPIN3Q5JUX0 258 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 OR52W1Q6IF63 320 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 LHFPL2Q6ZUX7 228 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 RTN4RL2Q86UN3 420 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 ZDHHC13Q8IUH4 622 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 CCDC54Q8NEL0 328 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 DNAAF1Q8NEP3 725 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 OR51A4Q8NGJ6 313 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 LEAP2Q969E1 77 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 COQ2Q96H96 371 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 RCC1LQ96I51 464 aaKnown RBP10.05□□□□□ -0.8
SKA1-205ENST00000494518 GABARAPL1Q9H0R8 117 aa10.05□□□□□ -0.8
SKA1-205ENST00000494518 BUB1B-PAK6H3BSN5 160 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 CLIC3O95833 236 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 FASP25445 335 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 ARHGDIBP52566 201 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 ISL1P61371 349 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 LTC4SQ16873 150 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 TMEM244Q5VVB8 128 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 ETV3LQ6ZN32 361 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 UTS2BQ765I0 119 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 LINC00482Q8N8I6 264 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 OR4D6Q8NGJ1 314 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 OR13C3Q8NGS6 347 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 C10orf35Q96D05 121 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 NOL4LQ96MY1 436 aaPredicted RBP10.04□□□□□ -0.8
SKA1-205ENST00000494518 SEBOXQ9HB31 216 aaPredicted RBP10.04□□□□□ -0.8
SKA1-205ENST00000494518 TAS2R3Q9NYW6 316 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 FRRS1LQ9P0K9 344 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 LINC00527Q9UJ94 153 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 HHLA2Q9UM44 414 aa10.04□□□□□ -0.8
SKA1-205ENST00000494518 FUOMA2VDF0 154 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 PSMB11A5LHX3 300 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 SAC3D1A6NKF1 404 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 SLC33A1O00400 549 aaPredicted RBP10.03□□□□□ -0.8
SKA1-205ENST00000494518 KDM4BO94953 1096 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 SNRNP70P08621 437 aaKnown RBP10.03□□□□□ -0.8
SKA1-205ENST00000494518 HTR1AP08908 422 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 CD34P28906 385 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 CEACAM3P40198 252 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 MNDAP41218 407 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 GLP1RP43220 463 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 CDC42P60953 191 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 CD69Q07108 199 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 HES1Q14469 280 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 HNF4GQ14541 408 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 C17orf58Q2M2W7 97 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 LPCAT4Q643R3 524 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 Q6P435 159 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 MRPL41Q8IXM3 137 aaKnown RBP10.03□□□□□ -0.8
SKA1-205ENST00000494518 OSR2Q8N2R0 312 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 OR56B4Q8NH76 319 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 CORO2AQ92828 525 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 TOMM40LQ969M1 308 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 RNFT2Q96EX2 444 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 NR1H4Q96RI1 486 aaPredicted RBP10.03□□□□□ -0.8
SKA1-205ENST00000494518 COMMD4Q9H0A8 199 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.03□□□□□ -0.8
SKA1-205ENST00000494518 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.03□□□□□ -0.8
SKA1-205ENST00000494518 MOB4Q9Y3A3 225 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 PCDHGB5Q9Y5G0 923 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 HSPE1-MOB4S4R3N1 261 aa10.03□□□□□ -0.8
SKA1-205ENST00000494518 DAPL1A0PJW8 107 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 NUDT19A8MXV4 375 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 J3QL48 77 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 J3QLW9 94 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 DEGS1O15121 323 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 ZNF19P17023 458 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 SMCPP49901 116 aaPredicted RBP10.02□□□□□ -0.81
SKA1-205ENST00000494518 GNG10P50151 68 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 PRRX1P54821 245 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 BNIP1Q12981 228 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 DIAPH2-AS1Q14236 149 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 ZSCAN26Q16670 478 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 C8orf86Q6ZUL3 223 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 DRAM1Q8N682 238 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 OR8J1Q8NGP2 316 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 OR13A1Q8NGR1 328 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 RFKQ969G6 155 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 RPEQ96AT9 228 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 SPSB1Q96BD6 273 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 KIRREL1Q96J84 757 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 DUX3Q96PT4 197 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 MBOAT4Q96T53 435 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 GABARAPL3Q9BY60 117 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 AASSQ9UDR5 926 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 ENOPH1Q9UHY7 261 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 OAZ3Q9UMX2 235 aa10.02□□□□□ -0.81
SKA1-205ENST00000494518 AP4S1Q9Y587 144 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms