RNA–Protein interactions for RNA: ENST00000494458.1

MSH5-217, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 520 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-217ENST00000494458 OR2H2O95918 312 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 PLATP00750 562 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 KNG1P01042 644 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 PMP2P02689 132 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 CSN2P05814 226 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 WNT2P09544 360 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 OR4E1P0C645 316 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 RPS2P15880 293 aaKnown RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 PRKACAP17612 351 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 FPR2P25090 351 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 MDH2P40926 338 aaKnown RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 RBM39Q14498 530 aaKnown RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 EFNB3Q15768 340 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 CARTPTQ16568 116 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 MST1LQ2TV78 715 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 C4orf17Q53FE4 359 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ATAD3CQ5T2N8 411 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ADAM5Q6NVV9 412 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ACP7Q6ZNF0 438 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ZNF497Q6ZNH5 498 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 C20orf204Q6ZNR8 217 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 DRAXINQ8NBI3 349 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 SUMF2Q8NBJ7 301 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 OR11H7Q8NGC8 314 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 LILRB1Q8NHL6 650 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 MRPL30Q8TCC3 161 aaKnown RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 DYRK2Q92630 601 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 MEGF10Q96KG7 1140 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ZNF488Q96MN9 340 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 RTBDNQ9BSG5 229 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 ST6GALNAC5Q9BVH7 336 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 DPCDQ9BVM2 203 aaPredicted RBP5.72□□□□□ -1.49
MSH5-217ENST00000494458 SHARPINQ9H0F6 387 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 TMEM165Q9HC07 324 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ETAA1Q9NY74 926 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 PIPOXQ9P0Z9 390 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 SHPKQ9UHJ6 478 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ZNF222Q9UK12 451 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 ATP23Q9Y6H3 246 aa5.72□□□□□ -1.49
MSH5-217ENST00000494458 NBEAQ8NFP9 2946 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 UBE2QL1A1L167 161 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 OR5H14A6NHG9 310 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 DEFB108AA8MXU0 73 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 TRDCB7Z8K6 153 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 E7EQL1 145 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 G3V3Q6 166 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 BOLA2-SMG1P6H3BVE0 249 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 H7C1Q1 480 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ABCD4O14678 606 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SH2D1BO14796 132 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 DEGS1O15121 323 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ATXN7O15265 892 aaPredicted RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 ZNF737O75373 536 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 IGHV1-46P01743 117 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 C1QBP02746 253 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 HNRNPCP07910 306 aaKnown RBP eCLIP5.71□□□□□ -1.5
MSH5-217ENST00000494458 CTXN2P0C2S0 81 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 IGFBP2P18065 325 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 CXCL3P19876 107 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 AMY2BP19961 511 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ANXA7P20073 488 aaKnown RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 GZMKP49863 264 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SELENOVP59797 346 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SEC61A1P61619 476 aaKnown RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 HERPUD1Q15011 391 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 PDCD1Q15116 288 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 FCN2Q15485 313 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SWI5Q1ZZU3 235 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SPRNQ5BIV9 151 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 TMEM128Q5BJH2 165 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 FAM209AQ5JX71 171 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 NKAPLQ5M9Q1 402 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SLC35E4Q6ICL7 350 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 BRICD5Q6PL45 260 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 TMEM17Q86X19 198 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 LDLRAD3Q86YD5 345 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 MUC20Q8N307 709 aaPredicted RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 GCSAMQ8N6F7 178 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 OR5H2Q8NGV7 314 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ZNF431Q8TF32 576 aaPredicted RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 CCDC107Q8WV48 283 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 MITD1Q8WV92 249 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ASB13Q8WXK3 278 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 TMEM230Q96A57 120 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 SCGB3A2Q96PL1 93 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 CABLES2Q9BTV7 478 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 WDR13Q9H1Z4 485 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 PPA2Q9H2U2 334 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 C5orf66Q9H5L9 145 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 ESRP2Q9H6T0 727 aaKnown RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 ZNF286AQ9HBT8 521 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 GPN1Q9HCN4 374 aaPredicted RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 RANGRFQ9HD47 186 aaPredicted RBP5.71□□□□□ -1.5
MSH5-217ENST00000494458 GCM1Q9NP62 436 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 KCNJ16Q9NPI9 418 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 NECAP2Q9NVZ3 263 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 COQ3Q9NZJ6 369 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 TAAR3PQ9P1P4 343 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 NDRG3Q9UGV2 375 aa5.71□□□□□ -1.5
MSH5-217ENST00000494458 OPN4Q9UHM6 478 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms