RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 HLA-DOBP13765 273 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 RAC2P15153 192 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FKBP2P26885 142 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 CLDN17P56750 224 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 OR10A3P58181 314 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 ARF1P84077 181 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 SRSF2Q01130 221 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 HGFACQ04756 655 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 MELKQ14680 651 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 AKIRIN2Q53H80 203 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 AWAT1Q58HT5 328 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 AKR1C8PQ5T2L2 129 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 DCAF12L2Q5VW00 463 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 PRAMEF8Q5VWM4 474 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 PRAMEF7Q5VXH5 474 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 DMKNQ6E0U4 476 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FAHD2BQ6P2I3 314 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 NIPAL3Q6P499 406 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 SLC35D2Q76EJ3 337 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 MEPCEQ7L2J0 689 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 BCDIN3DQ7Z5W3 292 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FBXL14Q8N1E6 418 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 SYS1Q8N2H4 156 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 C1orf162Q8NEQ5 155 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 OR2T33Q8NG76 320 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 OR10D4PQ8NGN7 298 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 OR10J5Q8NHC4 309 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF417Q8TAU3 575 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 C10orf105Q8TEF2 133 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FBXO17Q96EF6 278 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FAHD2AQ96GK7 314 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 MARS2Q96GW9 593 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF75AQ96N20 296 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 ZNF587Q96SQ5 575 aaPredicted RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 PBDC1Q9BVG4 233 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 SF3B5Q9BWJ5 86 aaKnown RBP7.01□□□□□ -1.29
HDAC6-234ENST00000493923 CRLF2Q9HC73 371 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 BCL2L10Q9HD36 194 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 RHCGQ9UBD6 479 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 FOXJ3Q9UPW0 622 aa7.01□□□□□ -1.29
HDAC6-234ENST00000493923 A0A087WWC5 75 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1W2PPQ1 181 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 ELOA3DA6NLF2 546 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 MS4A18H0YCH9 400 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 M0R036 132 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 OGG1O15527 345 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 TRAF3IP2O43734 574 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 DFFBO76075 338 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 LYPD3O95274 346 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 BGLAPP02818 100 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 THY1P04216 161 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 RPLP1P05386 114 aaKnown RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 CECR9P0C854 216 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 NR2C1P13056 603 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 GRPRP30550 384 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 GNALP38405 381 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 CX3CR1P49238 355 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 AKR1C2P52895 323 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 NDUFA6P56556 154 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 TAS2R20P59543 309 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 AKR1C1Q04828 323 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 GAMTQ14353 236 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 RBM39Q14498 530 aaKnown RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 JOSD1Q15040 202 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 SURF2Q15527 256 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 TAF13Q15543 124 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM249Q2WGJ8 235 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 MS4A18Q3C1V0 323 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 ELOA3BQ3SY89 546 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 MESTQ5EB52 335 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 LCE2AQ5TA79 106 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM225Q6GV28 225 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 RPL22L1Q6P5R6 122 aaKnown RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 ANKRD16Q6P6B7 361 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 HEPN1Q6WQI6 88 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 PRSS45Q7RTY3 260 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 LRRTM1Q86UE6 522 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 RBM45Q8IUH3 476 aaKnown RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM123Q8N131 208 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 ZCCHC24Q8N2G6 241 aaKnown RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 LFNGQ8NES3 379 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 ELOA3Q8NG57 546 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 GPR32P1Q8NGA4 272 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 OR4D11Q8NGI4 311 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 MFSD8Q8NHS3 518 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 SLC25A28Q96A46 364 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 FOXRED1Q96CU9 486 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 BOD1Q96IK1 185 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 SAMD8Q96LT4 415 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 ACTR3CQ9C0K3 210 aaPredicted RBP7□□□□□ -1.29
HDAC6-234ENST00000493923 FKRPQ9H9S5 495 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 FN3KRPQ9HA64 309 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 GPR35Q9HC97 309 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 DNAJB11Q9UBS4 358 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 A4GNTQ9UNA3 340 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 AMDHD2Q9Y303 409 aa7□□□□□ -1.29
HDAC6-234ENST00000493923 TMEM269A0A1B0GVZ9 245 aa6.99□□□□□ -1.29
HDAC6-234ENST00000493923 A0A1B0GW64 132 aa6.99□□□□□ -1.29
HDAC6-234ENST00000493923 A6NIN4 97 aa6.99□□□□□ -1.29
HDAC6-234ENST00000493923 IFITM5A6NNB3 132 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms