RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 CSNK2A3Q8NEV1 391 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 ATG101Q9BSB4 218 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 DNTTIP1Q9H147 329 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 HRH4Q9H3N8 390 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 TREM1Q9NP99 234 aa11.9□□□□□ -0.51
VCP-207ENST00000493886 ZNF816-ZNF321PA0A0X1KG74 233 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 AGPAT2O15120 278 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 DIRAS3O95661 229 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 TPT1P13693 172 aaKnown RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 HLA-GP17693 338 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 SUPT4H1P63272 117 aaKnown RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 BLOC1S1P78537 153 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 RAB32Q13637 225 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 VHLLQ6RSH7 139 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 TMPRSS7Q7RTY8 843 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 BAP18Q8IXM2 172 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 TMEM178AQ8NBL3 297 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 OR13G1Q8NGZ3 307 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 PIGCQ92535 297 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 CLUHP3Q96NS8 147 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 MRPL37Q9BZE1 423 aaKnown RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 PLEKHJ1Q9NW61 149 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 RNF24Q9Y225 148 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 ZNF318Q5VUA4 2279 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 EP300Q09472 2414 aaPredicted RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 TMEM218A2RU14 115 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 NKX2-8O15522 239 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 CA11O75493 328 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 PVALBP20472 110 aaPredicted RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 CCNOP22674 350 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 SRSF6Q13247 344 aaKnown RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 RTL6Q6ICC9 239 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 PHYHIPLQ96FC7 376 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 HDHD3Q9BSH5 251 aaPredicted RBP11.89□□□□□ -0.51
VCP-207ENST00000493886 SLC7A11Q9UPY5 501 aa11.89□□□□□ -0.51
VCP-207ENST00000493886 TRGV5A0A0B4J1U4 118 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 ZNF503-AS2A6NEH8 195 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 ZNF705EA8MWA4 302 aaPredicted RBP11.88□□□□□ -0.51
VCP-207ENST00000493886 SERPINA5P05154 406 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 RCC1P18754 421 aaPredicted RBP11.88□□□□□ -0.51
VCP-207ENST00000493886 FUT6P51993 359 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 TAS2R46P59540 309 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 CLN3Q13286 438 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 PLCXD3Q63HM9 321 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 LDLRAD3Q86YD5 345 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 FAM122AQ96E09 287 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 WDYHV1Q96HA8 205 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 SPRR3Q9UBC9 169 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 GPR132Q9UNW8 380 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 CD79AP11912 226 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 CCL2P13500 99 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 TAF9Q16594 264 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 HAGHLQ6PII5 290 aaPredicted RBP11.88□□□□□ -0.51
VCP-207ENST00000493886 MEX3BQ6ZN04 569 aaKnown RBP11.88□□□□□ -0.51
VCP-207ENST00000493886 ZNF383Q8NA42 475 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 ASCL3Q9NQ33 180 aa11.88□□□□□ -0.51
VCP-207ENST00000493886 TEX13DA0A0J9YY54 714 aaPredicted RBP11.87□□□□□ -0.51
VCP-207ENST00000493886 C5orf49A4QMS7 147 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 FIGNL2A6NMB9 653 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ZNHIT1O43257 154 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 TAS2R31P59538 309 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 Q5PR19 223 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SLC25A24Q6NUK1 477 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 OR4A4PQ8NGN8 299 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 GLYATL2Q8WU03 294 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 RTBDNQ9BSG5 229 aaPredicted RBP11.87□□□□□ -0.51
VCP-207ENST00000493886 PARP12Q9H0J9 701 aaKnown RBP11.87□□□□□ -0.51
VCP-207ENST00000493886 TLNRD1Q9H1K6 362 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ZDHHC11Q9H8X9 412 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 CYTL1Q9NRR1 136 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 IGKV1D-8A0A087WSZ0 117 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 IGKV1-12A0A0C4DH73 117 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 CEACAM18A8MTB9 384 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SFT2D2O95562 160 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 IGKV1D-12P01611 117 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 TNFSF10P50591 281 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SMCO1Q147U7 214 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 EMG1Q92979 244 aaKnown RBP11.87□□□□□ -0.51
VCP-207ENST00000493886 TECTBQ96PL2 329 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SUCNR1Q9BXA5 334 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SMIM3Q9BZL3 60 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 PRSS50Q9UI38 385 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 SOX15O60248 233 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 GLI4P10075 376 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 RAB4AP20338 218 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 S100A7P31151 101 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ID4P47928 161 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 RAB1AP62820 205 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 PDZK1IP1Q13113 114 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 AADACL3Q5VUY0 350 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ETV3LQ6ZN32 361 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 LHFPL1Q86WI0 220 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 C12orf49Q9H741 205 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ZNF581Q9P0T4 197 aa11.87□□□□□ -0.51
VCP-207ENST00000493886 ARHGAP21Q5T5U3 1957 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 ZNF850A8MQ14 1090 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 NUDT19A8MXV4 375 aa11.86□□□□□ -0.51
VCP-207ENST00000493886 LRP3O75074 770 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms