RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 KHDC1LQ5JSQ8 128 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SPIN3Q5JUX0 258 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 C1orf100Q5SVJ3 147 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 KCTD8Q6ZWB6 473 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SLC25A26Q70HW3 274 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 C1QL2Q7Z5L3 287 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 LRRTM1Q86UE6 522 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 GLCCI1Q86VQ1 547 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 ZNF561Q8N587 486 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 C11orf42Q8N5U0 333 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 TEX29Q8N6K0 151 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 CD177Q8N6Q3 437 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 ZFP41Q8N8Y5 198 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 DEFB108BQ8NET1 73 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 OR52N4Q8NGI2 321 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 OR51A2Q8NGJ7 313 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 OR13C5Q8NGS8 318 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 OR13C9Q8NGT0 318 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 UFD1Q92890 307 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 CPNE2Q96FN4 548 aaPredicted RBP5.55□□□□□ -1.52
VPS52-219ENST00000493379 C1orf147Q96MC9 270 aaPredicted RBP5.55□□□□□ -1.52
VPS52-219ENST00000493379 GAFA1Q96PS6 74 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 OR14A2Q96R54 314 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 UQCC2Q9BRT2 126 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 DCTN5Q9BTE1 182 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 SHARPINQ9H0F6 387 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 ZNF696Q9H7X3 374 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 UNKLQ9H9P5 680 aaKnown RBP5.55□□□□□ -1.52
VPS52-219ENST00000493379 NOX4Q9NPH5 578 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 MMP26Q9NRE1 261 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 NDUFB11Q9NX14 153 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 CLN8Q9UBY8 286 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 KCNS2Q9ULS6 477 aa5.55□□□□□ -1.52
VPS52-219ENST00000493379 LOC105371242A0A075B767 164 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 TRAV1-2A0A0B4J238 106 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 IGHV2-70DA0A0C4DH43 119 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 A0A0G2JMP0 313 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 A0A0X1KG70 313 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 ISPDA4D126 451 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 C9orf118A6NHY6 69 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 H3BSH0 61 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 GABRPO00591 440 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 MAGEB3O15480 346 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 ADAM20O43506 726 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 ZNF780AO75290 641 aaPredicted RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 CSN2P05814 226 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 SFTPBP07988 381 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 RPS2P15880 293 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 ADRA2CP18825 462 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 EEF1B2P24534 225 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 ERP29P30040 261 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 ZNF93P35789 620 aaPredicted RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 NPBWR2P48146 333 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 SOX2P48431 317 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 BPIFB3P59826 476 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 FGF12P61328 243 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 GNB2P62879 340 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 ARMCX4Q5H9R4 360 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 FAM120AOSQ5T036 256 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 LIPKQ5VXJ0 399 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 Q6P435 159 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 METAP1DQ6UB28 335 aaPredicted RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 C17orf107Q6ZR85 190 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 C9orf139Q6ZV77 190 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 FAM58AQ8N1B3 248 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 KIR3DL3Q8N743 410 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 NKAIN3Q8N8D7 197 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 CHST4Q8NCG5 386 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 C19orf18Q8NEA5 215 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 OR4M2Q8NGB6 313 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 OR5T2Q8NGG2 359 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 OR5D13Q8NGL4 314 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 TRMT10AQ8TBZ6 339 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 TBC1D15Q8TC07 691 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 TSEN15Q8WW01 171 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 UPRTQ96BW1 309 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 MRPS24Q96EL2 167 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 SNX22Q96L94 193 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 NR1H4Q96RI1 486 aaPredicted RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 CCL13Q99616 98 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 PRDM13Q9H4Q3 707 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 NARFLQ9H6Q4 476 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 TAS2R4Q9NYW5 299 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 DNAJB11Q9UBS4 358 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 GHRLQ9UBU3 117 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 RPUSD1Q9UJJ7 312 aaKnown RBP5.54□□□□□ -1.52
VPS52-219ENST00000493379 NOTCH3Q9UM47 2321 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 TENM2Q9NT68 2774 aa5.54□□□□□ -1.52
VPS52-219ENST00000493379 IGHV3OR15-7A0A075B7D8 119 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 A0A1B0GW55 424 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 MAGEA13PA6NCF6 341 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A10PA6NDY2 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A18PA6NE21 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A16PA6NEW6 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A20PA6NIJ5 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A8PA6NJQ4 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A7PA6NKC0 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A22PA8MWA6 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A12PA8MX19 464 aa5.53□□□□□ -1.52
VPS52-219ENST00000493379 FAM90A5PA8MXJ8 464 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms