RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 TMEM38BQ9NVV0 291 aa14.36□□□□□ -0.11
BRAT1-206ENST00000493232 B4E171 279 aa14.36□□□□□ -0.11
BRAT1-206ENST00000493232 TSPAN7P41732 249 aa14.36□□□□□ -0.11
BRAT1-206ENST00000493232 RASL11BQ9BPW5 248 aa14.36□□□□□ -0.11
BRAT1-206ENST00000493232 FRRS1LQ9P0K9 344 aa14.36□□□□□ -0.11
BRAT1-206ENST00000493232 UBE2L3P68036 154 aaKnown RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 ZBTB34Q8NCN2 500 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 OR5R1Q8NH85 324 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 ATP5SQ99766 215 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 SLC25A22Q9H936 323 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 MEX3AA1L020 520 aaKnown RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 PMELP40967 661 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 VAMP3Q15836 100 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 COL13A1Q5TAT6 717 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 PDPNQ86YL7 162 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 C1orf174Q8IYL3 243 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 GVQW1Q8N7I0 195 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 OR5A2Q8NGI9 324 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 VAMP8Q9BV40 100 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 PCDHGA9Q9Y5G4 932 aaKnown RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 HYAL3O43820 417 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 HTR1DP28221 377 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 SLC25A40Q8TBP6 338 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 MBD1Q9UIS9 605 aaPredicted RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 BCORQ6W2J9 1755 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 ORM2P19652 201 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 BCL3P20749 454 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 VDAC1P21796 283 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 RNASEKQ6P5S7 137 aaKnown RBP14.35□□□□□ -0.11
BRAT1-206ENST00000493232 RNF133Q8WVZ7 376 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 PRNDQ9UKY0 176 aa14.35□□□□□ -0.11
BRAT1-206ENST00000493232 SPNS3Q6ZMD2 512 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 COA4Q9NYJ1 87 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 OR2T8A6NH00 312 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 CDIPTO14735 213 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 C3AR1Q16581 482 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 FBXW9Q5XUX1 488 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 DUSP18Q8NEJ0 188 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 DOK5Q9P104 306 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 TINAGQ9UJW2 476 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 KCNMB2Q9Y691 235 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 RGS13O14921 159 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 SPINT1O43278 529 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 SPINK9Q5DT21 86 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 TGIF2LYQ8IUE0 185 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 TGIF2LXQ8IUE1 241 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 ABHD1Q96SE0 405 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 TOLLIPQ9H0E2 274 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 SLC7A10Q9NS82 523 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 TRBV5-3A0A0A0MS03 114 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 RTP5Q14D33 572 aa14.34□□□□□ -0.11
BRAT1-206ENST00000493232 FAM157AC9JC47 383 aa14.33□□□□□ -0.11
BRAT1-206ENST00000493232 C16orf97H3BN30 126 aa14.33□□□□□ -0.11
BRAT1-206ENST00000493232 ORM1P02763 201 aa14.33□□□□□ -0.11
BRAT1-206ENST00000493232 HNRNPA3P51991 378 aaKnown RBP14.33□□□□□ -0.11
BRAT1-206ENST00000493232 OR4C45A6NMZ5 311 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 GNG7O60262 68 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 IQCJQ1A5X6 159 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 GEMIN2O14893 280 aaKnown RBP14.33□□□□□ -0.12
BRAT1-206ENST00000493232 EML2O95834 649 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 TMEM33P57088 247 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 POLR2GP62487 172 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRAT1-206ENST00000493232 HLA-DRB3P79483 266 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 OR1B1Q8NGR6 318 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 CCL27Q9Y4X3 112 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 DUXBA0A1W2PPF3 345 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 FFAR1O14842 300 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 HIST1H3AP68431 136 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 TIAL1Q01085 375 aaKnown RBP eCLIP14.33□□□□□ -0.12
BRAT1-206ENST00000493232 PNRC1Q12796 327 aaPredicted RBP14.33□□□□□ -0.12
BRAT1-206ENST00000493232 TMEM37Q8WXS4 190 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 UBTD1Q9HAC8 227 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 NAGKQ9UJ70 344 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 OPN1MWP04001 364 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 OPN1MW2P0DN77 364 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 OPN1MW3P0DN78 364 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 ACP1P24666 158 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 COX19Q49B96 90 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 CLEC9AQ6UXN8 241 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 DTD1Q8TEA8 209 aa14.33□□□□□ -0.12
BRAT1-206ENST00000493232 CLEC18BQ6UXF7 455 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 C9orf40Q8IXQ3 194 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 ZNF441Q8N8Z8 693 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 OR4D11Q8NGI4 311 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 ABHD3Q8WU67 409 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 PIPOXQ9P0Z9 390 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 MAP1BP46821 2468 aaKnown RBP14.32□□□□□ -0.12
BRAT1-206ENST00000493232 CDK5RAP2Q96SN8 1893 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 FCN1O00602 326 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 SOCS1O15524 211 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 PPYP01298 95 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 HOXD4P09016 255 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-206ENST00000493232 NQO2P16083 231 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 NFAM1Q8NET5 270 aaPredicted RBP14.32□□□□□ -0.12
BRAT1-206ENST00000493232 PRR7Q8TB68 274 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 CHST5Q9GZS9 411 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 FABP4P15090 132 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 DYNLT3P51808 116 aa14.32□□□□□ -0.12
BRAT1-206ENST00000493232 GABRA6Q16445 453 aa14.32□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms