RNA–Protein interactions for RNA: ENST00000492455.1

HMGB1P30-201, Transcript of high mobility group box 1 pseudogene 30, humanhuman

BASIC

Gene HMGB1P30, Length 606 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P30-201ENST00000492455 OR52A5Q9H2C5 316 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 MFSD1Q9H3U5 465 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 SDK2Q58EX2 2172 aa1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 COL5A1P20908 1838 aaPredicted RBP1.38□□□□□ -2.19
HMGB1P30-201ENST00000492455 SETD1AO15047 1707 aaKnown RBP1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 HIVEP2P31629 2446 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 PLXNB3Q9ULL4 1909 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGKV1OR2-108A0A075B7D4 117 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 TRAV8-3A0A0A6YYJ7 113 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHV3-21A0A0B4J1V1 117 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 A0A1B0GX12 115 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 GOLGA8IPA6NC78 632 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 FABP7O15540 132 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SGCEO43556 437 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 TCF21O43680 179 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ENTPD6O75354 484 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SOD3P08294 240 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SCGB1C2P0DMR2 95 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC2A1P11166 492 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 PTHLHP12272 177 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 CASQ1P31415 396 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 MAGEA6P43360 314 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 PLTPP55058 493 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR10A3P58181 314 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 C1QTNF8P60827 252 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 HBG1P69891 147 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 HBG2P69892 147 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 PRKCDQ05655 676 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 FMODQ06828 376 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 PRDX1Q06830 199 aaKnown RBP1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 TTMPQ5BVD1 217 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR10J3Q5JRS4 329 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 LDLRAD2Q5SZI1 272 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 LAMTOR1Q6IAA8 161 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 MARCH3Q86UD3 253 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZFP82Q8N141 532 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZIC4Q8N9L1 334 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR2M3Q8NG83 312 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ACTL9Q8TC94 416 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAM45AQ8TCE6 357 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SCGB1C1Q8TD33 95 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 C2orf15Q8WU43 125 aaKnown RBP1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 TWIST2Q8WVJ9 160 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ATP6V1G3Q96LB4 118 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 CYTH2Q99418 400 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 LINC01587Q99440 93 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 APOL4Q9BPW4 351 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ANAPC13Q9BS18 74 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 SHANK2-AS3Q9BTD1 123 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 FADS3Q9Y5Q0 445 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 R4GN34 69 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 USP42Q9H9J4 1324 aaKnown RBP1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 ADGRL1O94910 1474 aa1.37□□□□□ -2.19
HMGB1P30-201ENST00000492455 LINC00854A0A1B0GVQ3 168 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 A0A1W2PRG6 482 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 IQCF5A8MTL0 148 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 F5H5P2 479 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 M0QXV9 152 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 CRXO43186 299 aaPredicted RBP1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 TRGV3P03979 118 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 CGB3P0DN86 165 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 CGB7P0DN87 165 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF35P13682 527 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 SYT1P21579 422 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 NOS1P29475 1434 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 UGT2B10P36537 528 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF83P51522 516 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 FLOT2Q14254 428 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF235Q14590 738 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 KRTAP6-3Q3LI67 103 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF470Q6ECI4 717 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 DGAT2L6Q6ZPD8 337 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAM183BPQ6ZVS7 135 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 LRRC6Q86X45 466 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 C10orf107Q8IVU9 208 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 AMN1Q8IY45 258 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 SELENOHQ8IZQ5 122 aaKnown RBP1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 SLC25A45Q8N413 288 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 GATD1Q8NB37 220 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 PDCD6IPQ8WUM4 868 aaKnown RBP1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 MRAP2Q96G30 205 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 PGLYRP3Q96LB9 341 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 OLFM3Q96PB7 478 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 OR2V2Q96R30 315 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 TXNIPQ9H3M7 391 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 RHOFQ9HBH0 211 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 NRBP2Q9NSY0 501 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ZNF586Q9NXT0 402 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 TAS2R1Q9NYW7 299 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 CFAP45Q9UL16 551 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 C14orf166Q9Y224 244 aaKnown RBP1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 LTBP4Q8N2S1 1624 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ABCB11O95342 1321 aa1.36□□□□□ -2.19
HMGB1P30-201ENST00000492455 ADAMTSL3P82987 1691 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 PRR14LQ5THK1 2151 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 POLR3AO14802 1390 aaPredicted RBP1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHV1-45A0A0A0MS14 117 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 IGHV2-26A0A0B4J1V2 119 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 A0A1W2PNN7 141 aa1.35□□□□□ -2.19
HMGB1P30-201ENST00000492455 FAM183AA6NL82 134 aa1.35□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms